Gene SeHA_C2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2993 
Symbol 
ID6490676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2931657 
End bp2932721 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content59% 
IMG OID642743149 
Productglycine betaine transporter membrane protein 
Protein accessionYP_002046773 
Protein GI194449937 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4176] ABC-type proline/glycine betaine transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.905763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0117582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC AAACGAATCC GTGGGATACC GCACAGGTGG CCGATACTAC GACGCAAACG 
GCTGATGCCT GGGGAACACC GGCAGGCGTA GCCACGGACG GCGGCAGTAC CGACTGGTTG
AACAGCGCGC CCGCGCCAGC CCCTGAACAC TTTTCTCTTC TGGACCCGTT CCATAAGACG
CTGATCCCGC TGGATAGCTG GGTCACAGAG GGAATCGACT GGGTCGTCAC CCATTTCCGT
CCCCTTTTTC AGGGGATTCG TGTGCCGGTG GATTACATCC TTAACGGCTT TCAGCAACTG
CTGCTGGGAA TGCCCGCCCC TGTGGCGATT ATTCTCTTTG CGCTGATTGC CTGGCAGGTT
TCCGGCGTGG GCATGGGGAT CGCAACGCTG ATATCGCTGA TCGCCATCGG CGCGATCGGC
GCCTGGTCGC AGGCGATGAT TACCCTGGCG CTGGTATTGA CCGCCCTGTT GTTCTGCGTC
GTGATCGGAT TACCGATGGG AATCTGGCTG GCGCGCAGCC CGCGCGCGGC CAAAATAGTT
CGTCCGCTGC TGGATGCGAT GCAGACCACG CCCGCGTTTG TCTATCTGGT GCCGATTGTC
ATGTTATTCG GCATCGGTAA CGTGCCGGGC GTGGTGGTGA CGATTATTTT TGCTCTACCG
CCGATTATAC GCCTGACGAT CCTGGGCATT AACCAGGTGC CTGCCGACTT AATTGAAGCG
TCGCGCTCGT TCGGCGCCAG CCCGCGCCAA ATGTTGTTCA AAGTGCAACT ACCGCTGGCG
ATGCCCACCA TTATGGCAGG CGTTAATCAG ACGCTGATGC TGGCTCTCTC AATGGTCGTC
ATCGCCTCGA TGATTGCGGT CGGCGGGCTT GGCCAGATGG TATTACGCGG CATTGGCCGT
CTTGATATGG GGCTGGCAAC CGTCGGCGGC GTCGGCATTG TGATTCTCGC CATCATTCTG
GACCGTCTGA CGCAGGCCGT CGGGCGCGAC TCGCGTAGCC GCGGTAACCG TCGCTGGTAT
ACCACCGGTC CTGTTGGGCT AATCACCCGC CCTTTCGTTA AGTAA
 
Protein sequence
MADQTNPWDT AQVADTTTQT ADAWGTPAGV ATDGGSTDWL NSAPAPAPEH FSLLDPFHKT 
LIPLDSWVTE GIDWVVTHFR PLFQGIRVPV DYILNGFQQL LLGMPAPVAI ILFALIAWQV
SGVGMGIATL ISLIAIGAIG AWSQAMITLA LVLTALLFCV VIGLPMGIWL ARSPRAAKIV
RPLLDAMQTT PAFVYLVPIV MLFGIGNVPG VVVTIIFALP PIIRLTILGI NQVPADLIEA
SRSFGASPRQ MLFKVQLPLA MPTIMAGVNQ TLMLALSMVV IASMIAVGGL GQMVLRGIGR
LDMGLATVGG VGIVILAIIL DRLTQAVGRD SRSRGNRRWY TTGPVGLITR PFVK