Gene SeHA_C2992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2992 
SymbolproV 
ID6487961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2930462 
End bp2931664 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content50% 
IMG OID642743148 
Productglycine betaine transporter ATP-binding subunit 
Protein accessionYP_002046772 
Protein GI194450407 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4175] ABC-type proline/glycine betaine transport system, ATPase component 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.718604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0138097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA AATTAGAAGT GAAGAATCTG TATAAAATAT TTGGAGAGCA TCCACAGCGT 
GCCTTCAAAT ATATTGAAAA GGGACTATCG AAAGAGCAAA TACTGGAAAA AACGGGGCTA
TCGCTTGGCG TTAAAGACGC CAGTCTGGCC ATTGAAGAAG GCGAGATATT TGTCATCATG
GGATTATCCG GCTCGGGTAA ATCCACAATG GTACGCCTTC TCAATCGCCT GATTGAACCC
ACCCGCGGAC AGGTACTGAT CGACGGCGTT GATATTGCCA AAATATCAGA CGCTGAGCTT
CGCGAGGTGC GCAGGAAAAA GATTGCGATG GTCTTCCAGT CATTTGCGCT CATGCCGCAT
ATGACCGTGC TGGATAATAC GGCATTCGGT ATGGAATTAG CGGGCATCGC GGCGCAAGAG
CGTCGCGAAA AAGCGTTGGA CGCCTTGCGT CAGGTGGGGC TTGAAAATTA CGCTCATGCC
TATCCGGATG AACTTTCCGG TGGGATGCGT CAGCGTGTTG GACTTGCCCG CGCGCTGGCA
ATCAACCCTG ATATCTTATT AATGGATGAA GCGTTTTCCG CCCTCGATCC ATTAATTCGT
ACCGAAATGC AGGATGAGCT GGTGAAATTA CAGGCGAAAC ATCAGCGCAC CATTGTCTTT
ATTTCCCACG ATCTTGATGA GGCTATGCGT ATTGGCGACA GGATTGCCAT TATGCAAAAT
GGCGAGGTCG TACAGGTTGG TACGCCGGAT GAGATCCTGA ATAATCCGGC AAATGATTAT
GTCCGCACGT TCTTCCGTGG CGTGGATATT AGTCAGGTCT TTAGCGCCAA AGATATTGCC
CGTCGCAGTC CGGTCGGCTT AATTCGTAAA ACGCCAGGTT TCGGTCCCCG TTCGGCACTG
AAATTATTAC AGGACGAAGA CCGTGAATAT GGTTACGTCA TTGAGCGTGG CAATAAATTC
GTGGGCGTCG TGTCCATCGA CTCATTAAAA GCGGCATTAA GCCAGGCGCA AGGGATTGAA
GCGGCGCTTA TCGACGACCC TTTAGTCGTT GATGCGCAAA CCCCACTCAG CGAGTTGCTC
TCTCACGTCG GCCAGGCGCC CTGCGCGGTG CCGGTTGTCG ATGAAGAACA CCAGTATGTT
GGCATTATTT CAAAACGTAT GTTGCTACAG GCTTTAGATC GCGAGGGGGG TAACAATGGC
TGA
 
Protein sequence
MAIKLEVKNL YKIFGEHPQR AFKYIEKGLS KEQILEKTGL SLGVKDASLA IEEGEIFVIM 
GLSGSGKSTM VRLLNRLIEP TRGQVLIDGV DIAKISDAEL REVRRKKIAM VFQSFALMPH
MTVLDNTAFG MELAGIAAQE RREKALDALR QVGLENYAHA YPDELSGGMR QRVGLARALA
INPDILLMDE AFSALDPLIR TEMQDELVKL QAKHQRTIVF ISHDLDEAMR IGDRIAIMQN
GEVVQVGTPD EILNNPANDY VRTFFRGVDI SQVFSAKDIA RRSPVGLIRK TPGFGPRSAL
KLLQDEDREY GYVIERGNKF VGVVSIDSLK AALSQAQGIE AALIDDPLVV DAQTPLSELL
SHVGQAPCAV PVVDEEHQYV GIISKRMLLQ ALDREGGNNG