Gene SeHA_C2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2974 
Symbol 
ID6490040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp2918963 
End bp2919640 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content57% 
IMG OID642743130 
ProductDNA-binding transcriptional regulator CsiR 
Protein accessionYP_002046754 
Protein GI194449460 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.554532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.0581705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC TTTCCCAACC GACGGCCATA GATGGCTATC GCTGGCTTAA AAATGACATT 
ATTCGCGGCA CTTATCAGCC GGATGAGAAA CTGCGGATGA GTTTATTAAC CGCCCGCTAT 
GCGCTTGGCG TAGGGCCGCT GCGCGAGGCG CTGTCACAAC TGGTGGCGGA ACGGCTGGTC 
ACCGTGGTGA ATCAAAAAGG CTATCGCGTG GCGTCCATGT CAGAGGCGGA ACTCCTCGAT 
ATTTTTGACG CGCGCGCCAA TATGGAAGCG ATGCTGGTAC GCCTGGCGAT TGAACGCGGC 
GATGATGCGT GGGAGGCGGA GATCCTGGCG CGAGCGCATA TGCTCAGCAA ACTGGAAGCC 
AGCGATGCCA GTGAACATAT GCTCGATGAA TGGGATCAGC GCCACCAGGC GTTCCATTCC 
GCCATTGTCG CCGGGTGCGG CTCCCACTAT CTGCTACAGA TGCGCGAACG CTTATTTGAC 
CTGGCGGCCC GCTACCGCTT TATTTGGTTA CGTGAAACCG TTCTGTCCGT CGAGATGCTG 
GAAGATAAAC ATATCCAGCA TCACACGCTA ACCGAAGCGA TACTGGCGCG CGAGGCGGCA 
CGCGCCAGCG AATTAATGCG TCAGCATTTG CTGACGCCGA TTCCCATTAT TCGCCAGGCG 
ATGGCAGGGA AAATGTAG
 
Protein sequence
MTALSQPTAI DGYRWLKNDI IRGTYQPDEK LRMSLLTARY ALGVGPLREA LSQLVAERLV 
TVVNQKGYRV ASMSEAELLD IFDARANMEA MLVRLAIERG DDAWEAEILA RAHMLSKLEA 
SDASEHMLDE WDQRHQAFHS AIVAGCGSHY LLQMRERLFD LAARYRFIWL RETVLSVEML 
EDKHIQHHTL TEAILAREAA RASELMRQHL LTPIPIIRQA MAGKM