Gene SeHA_C2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2955 
Symbol 
ID6489917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp2901312 
End bp2902412 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content44% 
IMG OID642743112 
Producteffector protein pipB2 
Protein accessionYP_002046736 
Protein GI194449126 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.000000403936 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAAATT TTATCATGCA CTGTGTTGCT GTCTCTGGGA GAAAATATAT GGAGCGTTCA 
CTCGATAGTC TGGCTGGTAT GGCTAAATCT GCTTTTGGCG CGGGGACTTC TGCTGCTATG 
CGGCAAGCTA CCTCGCCCAA AACCATTCTG GAATATATCA TTAACTTTTT TACCTGTGGT 
GGGATACGTC GGAGAAATGA AACACAATAT CAGGAATTGA TAGAGACTAT GGCTGAGACA 
TTGAAAAGTA CAATGCCTGA CAGAGGTGCT CCGTTGCCAG AAAACATCAT CCTGGATGAT 
ATGGATGGGT GTCGTGTCGA ATTTAATCTT CCTGGTGAGA ATAACGAAGC TGGACAAGTT 
ATTGTACGAG TCAGTAAAGG CGACCATTCT GAGACAAGAG AAATTCCGCT TGTCTCTTTT 
GAAAAAATAT GTCGAGCTTT ACTATTCAGA TGCGAATTTT CTCTCCCTCA GGATTCTGTA 
ATATTAACTG CCCAGGGAGG CATGAATCTT AAAGGCGCTG TCCTTACCGG AGCAAATCTG 
ACGTCAGAAA ATTTATGTGA CGCAGACTTA AGCGGCGCAA ATTTAGAGGG GGCAGTGCTG 
TTTATGGCGG ATTGTGAAGG TGCAAATTTT AAGGGCGCAA ATCTATCGGG AACATCACTA 
GGCGACAGTA ATTTCAAGAA CGCCTGTCTG GAAGATAGCA TTATGTGTGG CGCTACCCTC 
GATCACGCTA ATCTTACTGG CGCCAATTTA CAACACGCGA GTCTGTTAGG CTGTAGCATG 
ATAGAATGTA ATTGCTCCGG TGCAAATATG GATCACACTA ATCTTTCAGG CGCAACCCTT 
ATACGTGCTG ATATGAGCGG TGCGACATTA CAGGGTGCTA CTATAATGGC TGCAATTATG 
GAAGACGCTG TCTTAACCCG GGCAAATCTG CGAAAGGCGA GTTTCATTTC TACGAACCTG 
GACGGGGCTG ATTTGGCTGA GGCTAATTTA AACAATACCT GTTTTAAAGA TTGTACACTA 
ACCCATTTGC GTACCGAAGA CGCCACAATG TCTACAAGTA CACAAACACT CTTTAACGAA 
TTTTATAGTG AAAATATTTA G
 
Protein sequence
MINFIMHCVA VSGRKYMERS LDSLAGMAKS AFGAGTSAAM RQATSPKTIL EYIINFFTCG 
GIRRRNETQY QELIETMAET LKSTMPDRGA PLPENIILDD MDGCRVEFNL PGENNEAGQV 
IVRVSKGDHS ETREIPLVSF EKICRALLFR CEFSLPQDSV ILTAQGGMNL KGAVLTGANL 
TSENLCDADL SGANLEGAVL FMADCEGANF KGANLSGTSL GDSNFKNACL EDSIMCGATL 
DHANLTGANL QHASLLGCSM IECNCSGANM DHTNLSGATL IRADMSGATL QGATIMAAIM 
EDAVLTRANL RKASFISTNL DGADLAEANL NNTCFKDCTL THLRTEDATM STSTQTLFNE 
FYSENI