Gene SeHA_C2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2907 
Symbol 
ID6489612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2848724 
End bp2850904 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content57% 
IMG OID642743071 
Productprotein secretion ABC efflux system permease and ATP-binding protein 
Protein accessionYP_002046695 
Protein GI194447941 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID[TIGR03375] type I secretion system ATPase, LssB family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCG CCGCCCCCGA TGTAGAAGAG GTACTCAGTG AGCGCGCGCT AAGCCAATGG 
GCGCAGGCCA TCAGCTATGT CGCCGGTCAT TATCGCGTTG CCTGTTCTCC CGGTTCAATT
CAGGCCAACG CCCCGTGGCT TAGGGGTAAA AGCAGAACGA CCGCCTTAAC GCAGCTCGCG
CGGCAGGCGG GTTTATCCTT TCATGCGCCG GACATAGACA AAACGGCATT TAGTCAGTGG
CGATTGCCGT TGGTTGTCGA GCTCCGGGAC GGGCAGTTAT TGGTCATCGA ACATGTTAAT
GGCGAAGAGG CGGTAGACGT TTTTGTGATT GAAGAAGAGG GTCAGCGTAA CCGCCTGACG
CTCAGCGAGT TATTGCCGGA GATCCTCTAT GTTGCCGCGC TACGCCCGCT ATCGGCGCTC
AAGGATAGCC GCGTCGACCG CTATATCTCC CGCTTTAAAC CCGACTGGAT GCGCGAGCTG
GTTCTGCAGG ATATTCGCCC TTATTTACCG GTAATGGTCG CCGCCTTTCT GATTAACGTG
CTGTCGCTGG CCGGGATTGT GTTCTCTATG CAGGTTTACG ATCGGGTGAT CCCCGCTCAG
TCATATCCTA CCCTGTACGT GCTCTCCTTC GGCGTGCTGG TAGCGGTGCT GTTCGGTTTT
CTGCTGCGTG AAGCGCGTAC GCACATTATG GACGTGCTCG GTAAACGCGC CGATATGCGC
ATTTCCGATC GGGTATTCGG TCACGCGTTA AGGCTGCGCA ACAGCGCTAT TCCCCGTTCC
ACCGGCAGTT TTATCTCGCA GTTACGCGAA CTAGAGCAGA TCCGCGAGAT GATTACCTCT
TCAACGCTGG CGACCATTGT CGATCTGCCT TTCTTTTTCC TGTTTATGAT AGTCCTGGCG
ATTATTGCCC CACCGCTGGC ATGGATAGCG CCCGTGGCGG CTCTGCTGAT GATCCTGCCG
GGCGTCGCAC TGCAAAAAAA ACTGGCTGTC CTCGCCAACC AGGCCGCCCA CGAAGCGACG
CTACGCAATG CAGTCTTGGT CGAAAGCGTT CAGGGGCTGG AGGATATTAA ACTGATGCAG
GCGGAGAACC GCTTTCTTCA GCAGTGGAAT AGCTATATCC GTATTACCGG CGAGTCGGGT
CTACGCACCC GCAAACTCAC GCAAGGGCTT ATCAGTTGGG GGATGTCGGT ACAAAGTCTG
GTGTATGCCG CAGTGATTAT GTTCGGCGCG CCGATGGTTA TTGAAGGCAG TATGACTACC
GGCGCCGTGG TCGCCGCGTC GATGCTCGGC TCGCGGATGA TCGCGCCAAT GGCTAACCTG
TGCGGCGTGC TGGCGCGCTG GCAGCAGGTG AAAGCGGCGA AGATGGGTCT CGACAACATT
ATGCAACTGC CCACCGAGAC ACAGCATGAC GATAGCCTGA TACACCGCGA CATCCTCCAC
GGGCATTACC TCTTTGAAAA CGCTCAGTTT CGTTACCATA ACGACGATCA ACGCATACCG
TTGCGCCTCG TGCGTCTGGA GATCATGCCA GGCGAGCGGA TTGCGATACT GGGGCGTAAC
GGTGCGGGTA AATCCACACT TTTACAGGCG ATGGCGGGCG GCCTGGAGAT GATTCAGGGA
GATGCCCGGC TTGATAATCT CAGCTTGTCG CACATCGATA TGGCGGATTT ACGCCGCAAC
ATCGGCTTTC TTAGCCAGAA CGCGCGGCTT TTCTTCGGCA CCCTACGAGA GAACCTGACG
CTCGGCGCGC CGCACGCCAA CGATGAACAG ATTTTTGACG CGCTCGAAGT CAGCGGCGGC
GCCGTCTTCG TCAGGCGGCT GGCAAAAGGG TTGGATCATC CCATTATGGA GGGTGGTAAC
GGCCTGTCCG GCGGGCAGCG TCAGTCCCTG TTGCTGGCGA GAATGCTGCT GCGCTCCCCC
AATATTGTGC TACTTGACGA ACCCAGCGCC TCGCTGGACG AGCATACGGA ACGAGAGTTT
ATTCAGCGGT TACATCAGTG GCTTGGCAAT CGAACCCTGG TCGTCGCGAC GCACCGGGTA
CCAATACTGG AGCTGGTTGA GCGTGTCGTT GTCCTGAAAG AAGGACAACT GGTGATGGAT
GCGCCAAAAG CGCAGGCGCT TAACGCGGAT CGGATGCAAA GTCACCGTCG GGAGTGGAAA
AATGAAAATC AATCAGCATG A
 
Protein sequence
MTRAAPDVEE VLSERALSQW AQAISYVAGH YRVACSPGSI QANAPWLRGK SRTTALTQLA 
RQAGLSFHAP DIDKTAFSQW RLPLVVELRD GQLLVIEHVN GEEAVDVFVI EEEGQRNRLT
LSELLPEILY VAALRPLSAL KDSRVDRYIS RFKPDWMREL VLQDIRPYLP VMVAAFLINV
LSLAGIVFSM QVYDRVIPAQ SYPTLYVLSF GVLVAVLFGF LLREARTHIM DVLGKRADMR
ISDRVFGHAL RLRNSAIPRS TGSFISQLRE LEQIREMITS STLATIVDLP FFFLFMIVLA
IIAPPLAWIA PVAALLMILP GVALQKKLAV LANQAAHEAT LRNAVLVESV QGLEDIKLMQ
AENRFLQQWN SYIRITGESG LRTRKLTQGL ISWGMSVQSL VYAAVIMFGA PMVIEGSMTT
GAVVAASMLG SRMIAPMANL CGVLARWQQV KAAKMGLDNI MQLPTETQHD DSLIHRDILH
GHYLFENAQF RYHNDDQRIP LRLVRLEIMP GERIAILGRN GAGKSTLLQA MAGGLEMIQG
DARLDNLSLS HIDMADLRRN IGFLSQNARL FFGTLRENLT LGAPHANDEQ IFDALEVSGG
AVFVRRLAKG LDHPIMEGGN GLSGGQRQSL LLARMLLRSP NIVLLDEPSA SLDEHTEREF
IQRLHQWLGN RTLVVATHRV PILELVERVV VLKEGQLVMD APKAQALNAD RMQSHRREWK
NENQSA