Gene SeHA_C2891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2891 
SymbolrimM 
ID6490887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2824270 
End bp2824821 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content50% 
IMG OID642743056 
Product16S rRNA-processing protein RimM 
Protein accessionYP_002046680 
Protein GI194448986 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0806] RimM protein, required for 16S rRNA processing 
TIGRFAM ID[TIGR02273] 16S rRNA processing protein RimM 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.217231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value0.505241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCA AGCAACTCGC CGCACAAGTA CCCGCTGAAC CGGTTGTACT GGGGAAAATG 
GGTTCTTCAT ACGGTATCCG TGGTTGGCTC AGAGTGTTTT CCTCCACTGA AGACGCCGAA
AGCATTTTTG ACTATCAGCC CTGGTTTATC CAGAAGGCGG GTCAGTGGCA GCAGGTACAG
CTGGAAAGCT GGAAGCACCA CAATCAGGAT CTGATCATCA AGCTGAAAGG CGTTGACGAT
CGAGATGCCG CGAATCTTCT GACAAATTGC GAAATTGTCG TGGATTCCTC GCAACTTCCT
GCGCTTGAGG AGGGAGACTA CTACTGGAAA GACCTGATGG GCTGCCAGGT AGTCACCGCT
GAAGGCTACG ATCTCGGTAA AGTTATCGAC ATGATGGAAA CCGGGTCGAA TGACGTTCTC
GTCATTAAGG CGAACCTGAA AGATGCATTT GGTATCAAGG AACGACTAGT ACCGTTCCTC
GATGGGCAGG TTATCAAGAA AGTCGATCTC GCTACTCGTA CTATCGAAGT AGACTGGGAT
CCTGGTTTTT AA
 
Protein sequence
MMSKQLAAQV PAEPVVLGKM GSSYGIRGWL RVFSSTEDAE SIFDYQPWFI QKAGQWQQVQ 
LESWKHHNQD LIIKLKGVDD RDAANLLTNC EIVVDSSQLP ALEEGDYYWK DLMGCQVVTA
EGYDLGKVID MMETGSNDVL VIKANLKDAF GIKERLVPFL DGQVIKKVDL ATRTIEVDWD
PGF