Gene SeHA_C2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2880 
Symbol 
ID6489413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2814856 
End bp2815593 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content52% 
IMG OID642743045 
Productouter membrane protein assembly complex subunit YfiO 
Protein accessionYP_002046669 
Protein GI194448106 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID[TIGR03302] outer membrane assembly lipoprotein YfiO 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.218907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCA TGAAATATCT GGTGGCAGCA GCCACGTTGA GCCTGTTTCT GGCGGGTTGC 
TCGGGTTCAA AGGAAGAGGT GCCCGATAAT CCGCCGAATG AAATCTACGC GACTGCTCAG
CAAAAGCTGC AGGACGGTAA CTGGAAACAG GCAATAACGC AATTGGAAGC GTTAGATAAT
CGTTATCCAT TCGGACCGTA TTCTCAGCAG GTGCAGTTGG ATCTTATCTA CGCCTATTAC
AAAAACGCCG ATTTGCCGCT AGCGCAGGCC GCCATCGATC GTTTTATGCG TCTTAATCCA
ACGCACCCTA ATATTGACTA TGTCATGTAC ATGCGCGGCC TGACGAACAT GGCGCTGGAT
GATAGCGCGC TGCAAGGTTT CTTTGGCGTC GATCGCAGCG ATCGCGATCC GCAACATGCG
CGGGCGGCGT TCAATGACTT TTCGAAACTG GTACGCAGCT ATCCTAATAG CCAGTACACC
ACCGATGCCA CTAAGCGTCT GGTATTCCTG AAAGACCGTC TGGCGAAATA TGAATATTCC
GTCGCAGAGT ACTATACCGC GCGCGGCGCA TGGGTTGCGG TCGTAAACCG GGTAGAAGGT
ATGCTACGCA ATTATCCTGA TACGCAGGCC ACGCGCGATG CGTTGCCGCT GATGGAAAAC
GCCTATCGTC AGATGCAGCT GAATGCGCAG GCTGACAAAG TCGCGAAAAT TATTGCCGCT
AACAGCAAAA ACACCTGA
 
Protein sequence
MTRMKYLVAA ATLSLFLAGC SGSKEEVPDN PPNEIYATAQ QKLQDGNWKQ AITQLEALDN 
RYPFGPYSQQ VQLDLIYAYY KNADLPLAQA AIDRFMRLNP THPNIDYVMY MRGLTNMALD
DSALQGFFGV DRSDRDPQHA RAAFNDFSKL VRSYPNSQYT TDATKRLVFL KDRLAKYEYS
VAEYYTARGA WVAVVNRVEG MLRNYPDTQA TRDALPLMEN AYRQMQLNAQ ADKVAKIIAA
NSKNT