Gene SeHA_C2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2860 
Symbol 
ID6488340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp2792452 
End bp2793396 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content50% 
IMG OID642743026 
Productputative LysR substrate binding domain 
Protein accessionYP_002046653 
Protein GI194448375 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.25895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTTA ATTCTGAATT CGAGATTTTC GATAGGTTGG TGGTTATGGA TCTGCGTCGG 
TTTATTACGC TGAAAACGGT AGTGGAAGAG GGCTCGTTTC TGCGGGCTTC GCAAAAGCTG 
TGCTGCACTC AGTCGACGGT AACTTTTCAT ATTCAACAGC TTGAACGTGA GTTTTCCCTG 
CAACTGTTCG AGAAAATAGG GCGCCGAATG TGCCTGACCA ATGAGGGGAA AAAGCTGATG 
CCGCATATCC ATGAACTGAC GCGTGTGATG GAGTCGATTC GTGAAGCCGC AAGACAGGAT 
GCGGAACCCG GCGGAGAGCT GCGCGTGGCG ACAGGTGAAA CCTTACTGGC GTACAAAATG 
CCGCAGGTTT TACAACGTTT TAAGCTGCGA GCGCCGAATG TCAGATTGTC GCTACAGTCG 
CTGAATTGCT ATGTGATACG TGATGCGTTG CTGAATGACG AGGTCGATCT GGGCGTTTTT 
TATCGCGTAG GTAATGATGA CGCGCTCACG ATGCAGCAAT TGGGGAAGCA GTCGCTGGCG 
CTGGTGGCCT CTCCACTGCT ACAGGATGCT GATTTTACGC AGCCAGATCA GCATATTCCC 
TGTAGCTTCA TCATCAATGA ACCGCAATGT GTCTTCCGCC AGCTGTTTGA AAGTACGCTA 
CGGCAGAGGC GGATTACGCT GGAAAACACC ATTGAACTGT GGAGTATTGA AAGCATTAAA 
CAGTGTGTGG CTGCTAACCT GGGCATCAGC TTTTTACCAC GTTTTGCCGT TGAACGAGAA 
CTTAGTACCG GTCAGTTGAA AGAGCTGCCG TTTGGCGCGC CGTCGCTATC GATCATGGCG 
CTGTGCGCCC ATCATGCCGG GAAAGCGGTC AGCCCGGCAA TGCAGATATT TATGCAGTGT 
ATGGAGGCGT GTTTTACCGT GGAAGATAAA AAAATGCCGG GTTAA
 
Protein sequence
MFFNSEFEIF DRLVVMDLRR FITLKTVVEE GSFLRASQKL CCTQSTVTFH IQQLEREFSL 
QLFEKIGRRM CLTNEGKKLM PHIHELTRVM ESIREAARQD AEPGGELRVA TGETLLAYKM 
PQVLQRFKLR APNVRLSLQS LNCYVIRDAL LNDEVDLGVF YRVGNDDALT MQQLGKQSLA 
LVASPLLQDA DFTQPDQHIP CSFIINEPQC VFRQLFESTL RQRRITLENT IELWSIESIK 
QCVAANLGIS FLPRFAVERE LSTGQLKELP FGAPSLSIMA LCAHHAGKAV SPAMQIFMQC 
MEACFTVEDK KMPG