Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2858 |
Symbol | |
ID | 6490310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 2791100 |
End bp | 2792434 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642743025 |
Product | ATP-dependent RNA helicase SrmB |
Protein accession | YP_002046652 |
Protein GI | 194451369 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.197769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTAA CGACTTTTTC CGAACTTGAA CTCGACGAAA GCCTGCTGGA TGCCCTCCAG GATAAAGGTT TCACTCGCCC GACCGCCATT CAGGCTGCCG CCATTCCGCC TGCGCTCGAT GGCCGTGATG TACTCGGTTC TGCGCCGACA GGCACCGGTA AAACGGCGGC ATATCTGCTG CCGGCGTTGC AGCACCTGCT CGACTTTCCG CGTAAAAAAT CGGGGCCGCC GCGCATTCTG ATCCTGACGC CAACCCGCGA ACTGGCAATG CAGGTTGCCG ATCACGCTCG TGAACTGGCT AAGCATACTC ATCTGGATAT CGCCACGATT ACCGGCGGCG TGGCCTATAT GAACCATGCT GAAGTGTTTA GCGAAAACCA GGATATCGTG GTCGCCACGA CGGGCCGTCT GCTGCAATAT ATAAAAGAAG AGAACTTTGA CTGCCGGGCG GTTGAAACAC TGATCCTTGA CGAAGCTGAC CGGATGCTCG ACATGGGCTT CGCTCAGGAC ATTGAACATA TCGCTGGTGA GACCCGCTGG CGTAAACAAA CGATGCTGTT CTCCGCCACG CTGGAAGGCG ATGCGATTAA AGATTTTGCC GAGCGCCTGC TGGAAGACCC GGTTGAGGTT TCTGCCAATC CGTCAACCCG CGAGCGTAAG AAAATTCACC AGTGGTACTA CCGTGCCGAC AATTTCGAAC ATAAAGTTGC GCTGTTGAAG CACCTGCTAA AACAAGACGA TGCAACCCGT TCTATCGTGT TTGTACGTAA ACGTGAACGC GTCCATGAAT TGGCTGAAAC GCTGCGTCTG GCAGGGATCA ACAATTGCTA TCTTGAAGGT GAGATGGCGC AGATCAAACG TAACGAAGGT ATTAAGCGTC TCACCGACGG TCGCGTTAAC GTGCTGGTCG CGACCGACGT CGCGGCACGC GGGATTGATA TTCCTGACGT CAGCCACGTC ATTAACTTCG ACATGCCGCG CAGTGGCGAT ACCTATCTGC ATCGCATTGG TCGTACAGGC CGTGCTGGCC GCAAAGGCAC TGCAATCTCG CTGGTAGAAG CCCACGACCA TCTGTTGCTG CTGAAAATCG GTCGCTACAT CGAAGAGCCG CTAAAAGCGC GCGTCATTGA TGAGCTTCGC CCGACCACGC GTGCGCCTAG CGAAAAGTTG ACCGGCAAAC CGTCGAAAAA AGTGCTGGCG AAACGCGCCG AGAAGAAAAA AGAGAAAGAA AAAGAGAAGC CGCGCGTGAA GAAACGTCAC CGCGATACAA AAAATATCGG TAAGCGCCGC AAGCCAAGCG GTACGAAAAT GCAGGAGCAA TCCAGCGAAG AGTGA
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Protein sequence | MTVTTFSELE LDESLLDALQ DKGFTRPTAI QAAAIPPALD GRDVLGSAPT GTGKTAAYLL PALQHLLDFP RKKSGPPRIL ILTPTRELAM QVADHARELA KHTHLDIATI TGGVAYMNHA EVFSENQDIV VATTGRLLQY IKEENFDCRA VETLILDEAD RMLDMGFAQD IEHIAGETRW RKQTMLFSAT LEGDAIKDFA ERLLEDPVEV SANPSTRERK KIHQWYYRAD NFEHKVALLK HLLKQDDATR SIVFVRKRER VHELAETLRL AGINNCYLEG EMAQIKRNEG IKRLTDGRVN VLVATDVAAR GIDIPDVSHV INFDMPRSGD TYLHRIGRTG RAGRKGTAIS LVEAHDHLLL LKIGRYIEEP LKARVIDELR PTTRAPSEKL TGKPSKKVLA KRAEKKKEKE KEKPRVKKRH RDTKNIGKRR KPSGTKMQEQ SSEE
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