Gene SeHA_C2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2817 
SymbolglyA 
ID6490110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2750369 
End bp2751622 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content57% 
IMG OID642742989 
Productserine hydroxymethyltransferase 
Protein accessionYP_002046616 
Protein GI194450912 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAGC GTGAAATGAA CATTGCCGAT TATGATGCCG AATTGTGGCA GGCTATGGAG 
CAGGAAAAAG TACGTCAGGA AGAGCACATC GAACTGATCG CCTCCGAAAA CTACACCAGC
CCGCGCGTGA TGCAGGCGCA GGGGTCTCAG CTGACCAACA AATACGCTGA AGGATATCCG
GGCAAGCGCT ACTATGGCGG CTGCGAATAC GTTGATGTCG TTGAGCAACT GGCTATCGAC
CGCGCGAAAG AACTGTTCGG CGCCGACTAC GCTAACGTGC AGCCGCACTC CGGTTCTCAG
GCTAACTTCG CTGTTTACAC CGCGCTGCTG CAACCGGGCG ATACCGTTCT GGGTATGAAC
CTGGCGCAGG GCGGCCACCT GACTCACGGC TCCCCGGTTA ACTTCTCCGG TAAACTGTAC
AACATCGTAC CTTACGGTAT CGATGAGTCC GGTAAAATTG ACTATGACGA GATGGCGAAG
CTGGCCAAAG AGCACAAGCC GAAGATGATT ATCGGTGGCT TCTCTGCCTA CTCCGGCGTG
GTTGACTGGG CAAAAATGCG TGAAATCGCT GACAGCATCG GCGCATACCT GTTTGTCGAC
ATGGCGCACG TGGCGGGCCT GATTGCCGCA GGCGTTTACC CGAACCCGGT TCCGCACGCT
CACGTTGTCA CCACCACCAC CCACAAAACC CTGGCGGGTC CGCGCGGCGG CCTGATCCTG
GCGAAGGGCG GCGATGAAGA GCTGTACAAA AAACTGAACT CCGCCGTGTT CCCAAGCGCG
CAGGGCGGCC CGCTGATGCA CGTGATCGCG GGTAAAGCGG TGGCGCTGAA AGAAGCGATG
GAGCCGGAGT TCAAAGTTTA CCAGCAGCAG GTGGCGAAAA ACGCCAAAGC GATGGTGGAA
GTGTTCCTCA ACCGCGGCTA CAAAGTGGTG TCTGGCGGCA CTGAAAACCA CCTGTTCCTG
CTGGACCTGG TGGATAAAAA CCTGACCGGT AAAGAAGCTG ACGCCGCACT GGGCCGCGCC
AACATCACCG TCAACAAAAA CAGCGTGCCG AACGATCCTA AGAGCCCGTT CGTGACCTCC
GGTATCCGTA TTGGTTCTCC GGCGGTTACT CGTCGCGGCT TCAAAGAAGC GGAAGTGAAA
GAGCTGGCTG GCTGGATGTG TGACGTGCTG GACAACATCA ATGATGAAGC CACCATTGAA
CGCGTGAAAG CGAAAGTACT GGATATCTGC GCCCGCTTCC CGGTTTACGC GTAA
 
Protein sequence
MLKREMNIAD YDAELWQAME QEKVRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP 
GKRYYGGCEY VDVVEQLAID RAKELFGADY ANVQPHSGSQ ANFAVYTALL QPGDTVLGMN
LAQGGHLTHG SPVNFSGKLY NIVPYGIDES GKIDYDEMAK LAKEHKPKMI IGGFSAYSGV
VDWAKMREIA DSIGAYLFVD MAHVAGLIAA GVYPNPVPHA HVVTTTTHKT LAGPRGGLIL
AKGGDEELYK KLNSAVFPSA QGGPLMHVIA GKAVALKEAM EPEFKVYQQQ VAKNAKAMVE
VFLNRGYKVV SGGTENHLFL LDLVDKNLTG KEADAALGRA NITVNKNSVP NDPKSPFVTS
GIRIGSPAVT RRGFKEAEVK ELAGWMCDVL DNINDEATIE RVKAKVLDIC ARFPVYA