Gene SeHA_C2738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2738 
Symbol 
ID6488624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2646138 
End bp2648099 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content59% 
IMG OID642742915 
Productputative oxidoreductase Fe-S binding subunit 
Protein accessionYP_002046542 
Protein GI194447960 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID[TIGR01318] glutamate synthase small subunit family protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGTT TTATTATGGC CAATAGCCAG CAGTGTCTGG GATGCCATGC CTGCGAGGTC 
GCCTGCGTAA TGGCTCACAA TGATGAGCGA CATGTTCTGA CGCCACAGCG CTATCAGCCC
CGAATTACTG TCATCAAACA TCAGCGCCAG CGCAGCGCGG TCACATGTCA CCATTGCGAA
GATGCGCCCT GCGCCCGTAG CTGTCCGAAC GGCGCGATCG CGCATATTAA CGACAGCGTG
CAGGTCAATG CGCAGAAGTG CATCGGCTGT AAATCCTGCG TCGTCGCCTG CCCATTCGGC
ACCATGCAGA TGGTATTGAC GCCCGTCGCG CCAAACCAGT TCAAAGCCAG CGCGCATAAA
TGCGATCTGT GTCAGGGACG TGAACAGGGG CCGGCCTGTG TGGAAAATTG CCCGGCGGAT
GCGCTGCAAC TGGTCACCGA AGACTCGTTG ACCCGTCTGG CTAAAACGCG ACGGCTGCGT
ACCGCCCGGC AGGAGATTCG CCCCTGGCAT ACCGTGGATA CACAACACAG TGGGACAGCA
AGCAGCAAAG TCGAGCGTAT GCAGGCGACG CCGCCGCGCG GCGAACCGGA TAAACTGGCG
ATTGAAGCGC GTAAAACCAC CTTTGAGGAA ATTTATCTGC CGTTTCGCGC CGCGCAGGCC
GAGCGTGAAG CGTCCCGCTG CCTCACATGC GGGGAACACA GTATCTGCGA ATGGACCTGT
CCGCTGCATA ACCATATTCC CCAGTGGATC GAACTGGTGA AAGCCGGCGA TATTGATGCG
GCGGTAGAGC TTTCTCACCA GACCAACTGC CTGCCGGAAA TTACCGGGCG CGTTTGTCCG
CAGGACCGGC TATGTGAAGG CGCGTGTACA CTCCGCGATG AGTATGGCGC GGTTACCATC
GGCAACATTG AGCGCTATAT CTCCGATCGC GCTCTGAGCA AAGGCTGGCG TCCCGACCTG
TCGGACGTAC AGAAGAGCGA TAAGCGCGTG GCGATTATCG GCGCGGGGCC GGCAGGTCTT
GCCTGCGCTG ACGTGCTGGC GCGCCATGGC GTAAGCGCCA CCGTCTACGA TCGCCATCCG
GAAATCGGCG GTTTGCTCAC CTTTGGTATT CCGGCTTTCA AACTGGATAA ATCTCTGCTG
GCGCGCCGTC GGGAGATCTT CAGCGCGATG GGGATTCGTT TCGAGCTTAA CTGCGAAGTA
GGGAAAGATA TTTCTCTGGA GACGCTGCTG GAGAGTTATG ACGCCGTCTT TGTCGGGGTA
GGAACCTATC GTTCCATGAA GGCTGATTTA CCGAATGAAG ACGCGCCGGG GGTATATGAT
GCGTTGCCAT TCCTCATCGC CAATACCAAA CAGGTGATGG GGCTTCCGGC GTTGCCTGAC
GAGCCGTTTA TTGATACTGC GGGCCTTAAC GTGGTTGTGC TGGGCGGCGG TGACACCGCA
ATGGACTGCG TACGTACGGC GCTGCGTCAT GGCGCTGCTA ACGTCACCTG CGCTTATCGC
CGCGATGAGG CCAATATGCC GGGGTCGAAA AAAGAGGTGA AAAACGCGCG GGAAGAGGGC
GCGAACTTTG AATTTAACGT TCAGCCGGTT GAGTTGGTGC TGGATACGCA CTGGCGCGCC
AGCGGTATTC GCTTTTTGCG TACGCGGCTT GGCGAACCGG ATGGTCAGGG GCGACGCCGC
CCGGTACCTG TACCGGACAG CGAGTTCGTG ATGCCGGCGG ATGCGGTCAT TATGGCGTTT
GGTTTTCATC CGCATGGTAT GTCGTGGCTG GAATCGCATG GCGTGAAGGT GGATAACTGG
GGACGTATTG CCGCCAGCGT CGAGAGCGAG TTTCGTTACC AGACGTCCAA CCCGAAAATT
TTCGCCGGCG GCGATGCGGT GCGCGGCGCC GATCTGGTGG TGACGGCGAT GGCAGAAGGC
CGACATGCTG CGCAGGGGAT ACTCGACTGG TTAGCTAAAT AA
 
Protein sequence
MNRFIMANSQ QCLGCHACEV ACVMAHNDER HVLTPQRYQP RITVIKHQRQ RSAVTCHHCE 
DAPCARSCPN GAIAHINDSV QVNAQKCIGC KSCVVACPFG TMQMVLTPVA PNQFKASAHK
CDLCQGREQG PACVENCPAD ALQLVTEDSL TRLAKTRRLR TARQEIRPWH TVDTQHSGTA
SSKVERMQAT PPRGEPDKLA IEARKTTFEE IYLPFRAAQA EREASRCLTC GEHSICEWTC
PLHNHIPQWI ELVKAGDIDA AVELSHQTNC LPEITGRVCP QDRLCEGACT LRDEYGAVTI
GNIERYISDR ALSKGWRPDL SDVQKSDKRV AIIGAGPAGL ACADVLARHG VSATVYDRHP
EIGGLLTFGI PAFKLDKSLL ARRREIFSAM GIRFELNCEV GKDISLETLL ESYDAVFVGV
GTYRSMKADL PNEDAPGVYD ALPFLIANTK QVMGLPALPD EPFIDTAGLN VVVLGGGDTA
MDCVRTALRH GAANVTCAYR RDEANMPGSK KEVKNAREEG ANFEFNVQPV ELVLDTHWRA
SGIRFLRTRL GEPDGQGRRR PVPVPDSEFV MPADAVIMAF GFHPHGMSWL ESHGVKVDNW
GRIAASVESE FRYQTSNPKI FAGGDAVRGA DLVVTAMAEG RHAAQGILDW LAK