Gene SeHA_C2668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2668 
Symbol 
ID6488019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2584361 
End bp2586550 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content51% 
IMG OID642742846 
Productdiguanylate cyclase 
Protein accessionYP_002046479 
Protein GI194451678 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGATA AGTGTAACGT ATTAAAAAAT ATAAAAATAT TCTTACTGGC CTTCTGCCTG 
ACCGTTCCGG CTATTCTGTT ATCTCGTCTC ATTTCTCCCC GCGCCACAAT TGATTCCAGC
TATATCTTTC TGGCCTGGCT ACCGCTCTGC GTCATGTTTT CCGTGCTGTT TTTATTTGGC
CGCCGTGGCG TCGCGCCGAT GGTAGGCGGA ATGATGTTGA CTAATGAATG GAATTTTCAT
TTACCTCTGC CACAGGCGAT GGTGCTGCTA TTTTGCCAGA CGTTTCCCGT GTTGCTGGTT
TGCGCTATCG TACGCTGGCA GCTGGGCGCG CGCTGGCGCT ACGGAATACC CAACCAAGGC
ATCTGGCTAC GCGTTTTCTG GTTAGGGTTA ATGACGCCGT TTGGTATAAA AATCAGTATG
CATCTGGCGG GGCACTACCT GGCTTTCCCG GTGACCATCT CTACCTTCTT TGGCACCGGC
ACCGCTATTT TCTCGATTGT TGATTTATTG AGTCTGATTT CTGCCGCGCT TATTTTTACC
CTCTTTTTCT ATTATCCGCT GCGGATGATA GTCAGCCCGC ACTATATTCG TATTTTCTGG
CGGAGGGATG TCGCTCCTTA TCTCGCCAAA GAAAAACGCC TGTTTACGCT TCTCTGGTTT
GCCACTCTGG CGACGCTATT AGCGGTGCTG TGTACGCCTT TCGAGACAAA GTATATTGCT
GGCTATCTGG TGCCAGTTCT GTTCATTGGA TTTACCATCG GCGTGGGGAA AATCAGCTAT
CCGCTGTTGA ATTTTAGTTG GGCTCTCACT GCGCTATTCC TGCTTAGCTA TAACCGCAAT
TTTCTGCAGG GCGTGGGTTC AGAATATTCG CTGGCATTTA TCCTTTCAGT TCTCATTTCT
TTTAGTATTT GTTTGTTGTA CATGGCGCGG ATTAATCAGC GTAGCGAATG GTTGAATCGA
CAATGGCACT CGCAGGCATT GACCGATCCG TTGACGCAAC TGCCTAACCT GCGTGCGCTG
GAGCAGTTTC TTTTACAGGA TGCCGGGCAA AGCGTGTGTT ATTTACGCAT GGAAAACCTG
GAATTTCTGA GCCGTCATTA CGGTATGCAG ATGCGCGTGC ATTGCGAACG CGAGGTGTTT
CGCGTGTTGC AGCCGCTGCT GCTGGAAAAG GAGAAAATTT TCCATCTGCC GGGCAGTGAA
TTATTGCTGG TACTGACGGG ACCGGAGACG GAAGCCCGCC TGCAATATAT GCTCAATGTG
CTTAATAACC GCAAAATTTA CTGGAACAAT ACCGGTTTGG ACATGGAATA CGGCGCATCG
TGGGGAACAT TCGATGGTCG CCAGGAAACC TTGCAACCGC TGTTGGGGCA ATTAAGCTGG
CTGGCGGAGC AATCCTGTTC GCACCGTCGG GTGCTTGCAC TGACCCAGAG TATTGAAGCC
GCTTCCGGGC AGACGACGGA ACGGGTGCTG CGGTTGCAGA AAATCCGTCA GGCGCTGGAG
CGCGGCGCGC TGGTTTTGTA TGCGCAACCC ATTCGCGACG CGCAGGGAAA AGGGTATGAC
GAGATTCTGA CGCGGCTTCG GTGCGACGAC GGTATCATGA TGCCGAATCA GTTCATTCCG
CTTATCGCCC AGTTTAACCT GAGCGTACGG TTTGATATGC AGGTGATGGA AGCGCTCCTG
CAATGGCTGT CCGCGCATCC TTCAGCGGAG CAGGGGGCGC GTTTCTCGGT TAATTTGATG
CCGCTGACGC TGCTGCAAAA AGAGACGGCG TCGCGCATTA TGCAGCTTTT TAAACGCTAT
GGCGTCCCGC CAGCTTCGGT CATCATCGAA ATTACTGAAG AACAGGCCTT CTCTCATTCC
GAAATCAGTA TGCACAATAT CAACCAGTTG CGTAAGTTTG GCCTAAAAAT CGCCATTGAT
GATTTCGGCA CCGGCTATGC AAACTATGAA CGGCTAAAAC GCCTCAAGGC GGACATCATT
AAAATCGACG GTTGTTTCGT AAAAGATATT CTGACGGACT CCCTGGATGC GATGATCGTG
AAATCCATCA CTGATTTAGC GAAAGCGAAA TCGTTGAGCG TCGTGGCTGA GTTTGTTGAA
ACGCCTGCGC AGCGCGATCT GCTATTGCAG CTTGGCGTAC ACAGTTTGCA GGGATATCTG
ATTGGCCGCC CGCGCCCGTT AGGCAAATAA
 
Protein sequence
MPDKCNVLKN IKIFLLAFCL TVPAILLSRL ISPRATIDSS YIFLAWLPLC VMFSVLFLFG 
RRGVAPMVGG MMLTNEWNFH LPLPQAMVLL FCQTFPVLLV CAIVRWQLGA RWRYGIPNQG
IWLRVFWLGL MTPFGIKISM HLAGHYLAFP VTISTFFGTG TAIFSIVDLL SLISAALIFT
LFFYYPLRMI VSPHYIRIFW RRDVAPYLAK EKRLFTLLWF ATLATLLAVL CTPFETKYIA
GYLVPVLFIG FTIGVGKISY PLLNFSWALT ALFLLSYNRN FLQGVGSEYS LAFILSVLIS
FSICLLYMAR INQRSEWLNR QWHSQALTDP LTQLPNLRAL EQFLLQDAGQ SVCYLRMENL
EFLSRHYGMQ MRVHCEREVF RVLQPLLLEK EKIFHLPGSE LLLVLTGPET EARLQYMLNV
LNNRKIYWNN TGLDMEYGAS WGTFDGRQET LQPLLGQLSW LAEQSCSHRR VLALTQSIEA
ASGQTTERVL RLQKIRQALE RGALVLYAQP IRDAQGKGYD EILTRLRCDD GIMMPNQFIP
LIAQFNLSVR FDMQVMEALL QWLSAHPSAE QGARFSVNLM PLTLLQKETA SRIMQLFKRY
GVPPASVIIE ITEEQAFSHS EISMHNINQL RKFGLKIAID DFGTGYANYE RLKRLKADII
KIDGCFVKDI LTDSLDAMIV KSITDLAKAK SLSVVAEFVE TPAQRDLLLQ LGVHSLQGYL
IGRPRPLGK