Gene SeHA_C2638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2638 
Symbol 
ID6492524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp2550781 
End bp2552010 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content45% 
IMG OID642742817 
Productintegrase 
Protein accessionYP_002046450 
Protein GI194449250 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value9.23997e-16 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGCGTATAA CATTGTGTAT AACTGAGTTC GATCTTTTTT CTATACACAT GCTGCTATCT 
GACATCCAAA TAAAACGAGC AAAACCGAAG GACAAACCCT ATACACTTAA CGATGGTATG 
GGACTATCAC TCCTCATCGA CACCACGGGC AGCAAAGGCT GGCGTTTCCG CTATCGCTTT 
GCAGGTAAAC CTAAGATGAT CTCCTTCGGC GTTTATGGCG ATGTGTCATT GGCACAAGCA 
CGTGCTAAAC GTGATGAGGC GCGTTCGATG TTAGCTAAAG GGATCAACCC AAGTGAAGCC 
AGAAAAGCGA ATAAAATAGC TTTACAGTTC GCGCATGAGA ACAGCTTTGA GTCTGTGGCC 
AGAGAATGGC ACTCATCGAA AAAAACCACC TGGTCAGAGG GGTATGCAAA AGAGGTTCTC 
AACTGCATGG AAAGGGATAT TTTCCCTTTC ATCGGACAAC GCCCAATTGA GCAGATTGAA 
CCACTAGAGC TGCTCACCGT CCTGCAAAAA ATTGAGAAAA GAGGTGCGCT AGAGCAAACC 
AGCAAGATCC GCCGCCGCTG CGGTGAAGTG CTTCGTTATG CTGTTGCCAC AGGTAGAGCA 
AAATATAATT TTGCACCCGA TTTAGCTATC GCACTCAACA AACCTAAAAC TCAACACTTC 
CCGTTCCTGA CTGAAAGCGA GTTGCCCGAG TTCGTCAATG CTCTGGATAA CTATCAGGGC 
AGTTTAGTCA CCAAATACGC CACCCAGCTA TTGATGCTAA CAGGCGTGCG AACAATTGAA 
CTACGCGCAG CGGAATGGGC TGAGTTTGAT TTAGATAATG CCTTATGGGA GATCCCCAAA 
GAACGGATGA AGAAACGCCG CCCCCATCTG GTTCCGTTAT CTACTCAGGC GATCAGCATC 
CTGAAAAAGC TGCAAGAAAT AACTGGGAAC TACAGCCTCG TTTTCCCTGG ACGAAATGAC 
GTAAGGAAGC CAATGAGTGA AGCCAGTATA AACAAAGTGA TAAAACTACT GGGCTATCAT 
GGTCGGTTAA CGGGCCATGG CTTCAGGCAT ACCATGAGTA CTATTTTGCA TGAGCTTGGT 
TTTGAAAGCG CTTGGATTGA GATGCAACTT GCGCATGTTG ATAAAAACTC TATTCGAGGA 
ACTTACAATC ATGCGCAATA TTTAGAAAAT CGAAGAAAAA TGATGCAAAT TTATAGTGAC 
ATGTTGCTAA ATGAGTTCCC TATTAAATAG
 
Protein sequence
MRITLCITEF DLFSIHMLLS DIQIKRAKPK DKPYTLNDGM GLSLLIDTTG SKGWRFRYRF 
AGKPKMISFG VYGDVSLAQA RAKRDEARSM LAKGINPSEA RKANKIALQF AHENSFESVA 
REWHSSKKTT WSEGYAKEVL NCMERDIFPF IGQRPIEQIE PLELLTVLQK IEKRGALEQT 
SKIRRRCGEV LRYAVATGRA KYNFAPDLAI ALNKPKTQHF PFLTESELPE FVNALDNYQG 
SLVTKYATQL LMLTGVRTIE LRAAEWAEFD LDNALWEIPK ERMKKRRPHL VPLSTQAISI 
LKKLQEITGN YSLVFPGRND VRKPMSEASI NKVIKLLGYH GRLTGHGFRH TMSTILHELG 
FESAWIEMQL AHVDKNSIRG TYNHAQYLEN RRKMMQIYSD MLLNEFPIK