Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2612 |
Symbol | pdxB |
ID | 6490183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2527125 |
End bp | 2528261 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642742792 |
Product | erythronate-4-phosphate dehydrogenase |
Protein accession | YP_002046426 |
Protein GI | 194448919 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.0289356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAAATTC TCGTTGATGA AAATATGCCT TACGCCCGCG AATTATTTAG CCGCCTGGGT GAGGTAAAGG CAGTGCCGGG TCGCCCGATC CCCGTTGAAG AATTGAACCA TGCCGATGCG TTAATGGTGC GTTCGGTCAC GAAAGTGAAT GAATCGCTGC TGAGCGGCAC GCCGATTAAC TTCGTTGGTA CTGCTACGGC AGGCACCGAT CATGTGGATG AGGCATGGCT GAAGCAGGCG GGCATCGGTT TTTCAGCCGC GCCCGGCTGT AATGCTATCG CCGTGGTGGA GTATGTGTTT TCCGCGCTGT TGATGCTGGC CGAACGTGAC GGCTTTTCGT TACGCGATCG CACTATAGGG ATTGTCGGCG TGGGTAACGT CGGAAGCCGG CTACAGACCA GGCTTGAAGC GTTGGGTATC CGCACGTTGC TGTGCGATCC GCCACGCGCC GCACGCGGGG ACGAGGGTGA TTTTCGTACG CTGGATGAGC TGGTGCAGGA AGCGGATGTC CTGACTTTCC ATACGCCGCT CTATAAAGAC GGACCGTATA AAACGCTGCA TCTGGCCGAT GAGACGCTGA TCCGTCGACT GAAACCCGGC GCCATTCTCA TTAACGCCTG CCGCGGTCCG GTGGTGGATA ACGCCGCGTT GCTGGCGCGA CTTAATGCCG GGCAGCCGCT GAGCGTGGTG CTTGATGTGT GGGAGGGCGA ACCGGATCTT AACGTCGCGC TACTGGAAGC CGTGGATATC GGCACGTCGC ATATTGCCGG CTATACGCTG GAAGGCAAAG CGCGCGGCAC CACCCAGGTC TTTGAGGCGT ATAGCGCGTT TATCGGTCGC GAGCAGCGTG TCGCGCTGGA GACATTACTG CCTGCGCCTG AGTTTGGTCG TATTACGCTT CATGGCCCGC TGGATCAACC GACGCTGAAA AGACTGGCGC ATTTGGTGTA TGATGTGCGC CGCGACGATG CGCCACTGCG TAAAGTCGCT GGAATTCCGG GTGAATTTGA TAAATTGCGT AAAAATTATC TTGAGCGCCG TGAATGGTCG TCTTTATACG TGATGTGTGA CGACGAAACG GCAGCCGCCT TGCTGTGTAA GCTAGGTTTT AACGCTGTTC ATCACCCGGC ACATTAA
|
Protein sequence | MKILVDENMP YARELFSRLG EVKAVPGRPI PVEELNHADA LMVRSVTKVN ESLLSGTPIN FVGTATAGTD HVDEAWLKQA GIGFSAAPGC NAIAVVEYVF SALLMLAERD GFSLRDRTIG IVGVGNVGSR LQTRLEALGI RTLLCDPPRA ARGDEGDFRT LDELVQEADV LTFHTPLYKD GPYKTLHLAD ETLIRRLKPG AILINACRGP VVDNAALLAR LNAGQPLSVV LDVWEGEPDL NVALLEAVDI GTSHIAGYTL EGKARGTTQV FEAYSAFIGR EQRVALETLL PAPEFGRITL HGPLDQPTLK RLAHLVYDVR RDDAPLRKVA GIPGEFDKLR KNYLERREWS SLYVMCDDET AAALLCKLGF NAVHHPAH
|
| |