| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2610 |
|---|
| Symbol | truA |
|---|
| ID | 6489740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 2525232 |
|---|
| End bp | 2526044 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642742790 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_002046424 |
|---|
| Protein GI | 194450234 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.422355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.0539335 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGAC AGCAATCATC GCCGGTCTAT AAAATTGCGC TGGGTATTGA GTACGACGGC
AGCAAGTATT ATGGCTGGCA GCGTCAGAAT GAAGTGCGCA GCGTGCAGGA AAAGCTGGAA
AAAGCGCTCT CGCAGGTGGC AAATGAACCT ATTAACGTGT TCTGCGCCGG GCGTACCGAT
GCCGGCGTTC ACGGCACCGG GCAGGTTGTC CATTTCGAAA CGACCGCATT GCGCAAAGAT
GCGGCATGGA CGCTGGGGGT AAATGCGAAT TTGCCTGGTG ACATTGCCGT GCGCTGGGTG
AAAACTGTAC CGGATGATTT TCACGCGCGA TTTAGCGCTA CGGCTCGCCG TTATCGCTAT
ATCATCTACA ATCATCGACT GCGTCCTGCG GTATTAGCAA AAGGCGTGAC GCATTACTAT
GAGCCGCTGG ATGCAGAGCG GATGCATCGC GCGGCGCAGT GTCTGCTTGG CGAAAATGAT
TTTACCTCGT TTCGCGCGGT GCAGTGCCAG TCGCGCACGC CGTGGCGTAA TGTGATGCAC
ATCAACGTTA CCCGCCACGG CCCTTATGTG GTGGTCGATA TCAAAGCGAA TGCCTTTGTT
CATCATATGG TCAGGAATAT TGTCGGCAGC CTGCTGGAAG TAGGCGCTCA CAACCAGCCG
GAGAGCTGGA TCGCAGAGCT GTTAGCGGCC AGGGACAGAA CGCTGGCGGC GGCAACGGCG
AAGGCGGAAG GGCTATATTT GGTTGCGGTG GATTACCCTG ACCGGTTTGA CCTTCCAAAA
CCGCCAATGG GCCCGCTATT TCTGGCGGAC TAA
|
|---|
| Protein sequence | MSGQQSSPVY KIALGIEYDG SKYYGWQRQN EVRSVQEKLE KALSQVANEP INVFCAGRTD
AGVHGTGQVV HFETTALRKD AAWTLGVNAN LPGDIAVRWV KTVPDDFHAR FSATARRYRY
IIYNHRLRPA VLAKGVTHYY EPLDAERMHR AAQCLLGEND FTSFRAVQCQ SRTPWRNVMH
INVTRHGPYV VVDIKANAFV HHMVRNIVGS LLEVGAHNQP ESWIAELLAA RDRTLAAATA
KAEGLYLVAV DYPDRFDLPK PPMGPLFLAD
|
|---|
| |