Gene SeHA_C2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2586 
Symbol 
ID6492031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp2502155 
End bp2503174 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content56% 
IMG OID642742766 
Productregulatory protein LacI 
Protein accessionYP_002046400 
Protein GI194448386 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00126886 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAC CCCGTAAACG GCGCAGTACC GGTAAAGTGA CTATCGCCGA TGTAGCCCAA 
CTTGCCGGTG TAGGCACGAT GACCGTATCA CGAGCCTTAC GCACGCCGGA ACAGGTCTCT 
GATAAACTCC GGGAAAAAAT CGAAGCGGCA GTGCATGAGC TGGGCTATAT GCCTAATCTC 
GCCGCCAGCG CGCTGGCGTC TGCCTCCTCG CACACCATCG CGATGGTCGT ACCGAACCTT 
GCGGAAGCGG GGTGTTCTGA AATGTTCGCC GGGCTGCAAC AAATTTTACA GCCCGCAGGC 
TACCAGATTA TGCTGGCGGA ATCGCAGCAT CGCGTGGAAC AAGAGGAGAA GCTGCTCGAA 
ACGCTGCTGG CCTCCAACAT TGCCGCGGCG ATTCTGCTTA GCGTCGAACA TAGCACTACC 
GTGCGCCAGT GGCTGAAAAA TGCCTCTATC CCGGTGATGG AGATGGGCGC GATTCGCAGC 
GATCCTATTG ATATGAATAT CGGTATTGAT AACGTTGCGG CAATGTATGA GCTGACGGAA 
ATGCTGATTC AGCGCGGTTA TCAGAATATC GGGCTGCTAT GCGCCAATCA GGAGCAGTGG 
ATTTTTCAGC AACATCTGCA CGGCTGGTAC AAAGCGATGC TTCGCCACCA TATGTCGCCA 
AACCGGGTGA TTAATGCCGC CTTGCCGCCC AATTTTTCTA CCGGCGCGTC GCAACTGCCG 
GAGTTTTTAC TGGCGTGGCC GGAGCTGGAC GCGCTGGTAT GCGTATCGGA TGAGCTGGCC 
TGCGGCGCGT TATACGAGTG CCAACGACGG CGGATCAAAG TTCCGGACGA TTTAGCGGTG 
GTCGGGTTTG GCGATAGCGA TGTCAGCCGG GTCTGCCAGC CGCCGTTAAC CACCATGACC 
GTACCGCACC GTAAGATTGG CAGTGAAGCC GGACGGGCGC TGTTGGAAAG GTTAAATCAG 
GGAAACTGGA GCGATCGGAA ATCCATCGCC TCCAGTTTAT GTATGCGGGA AAGCTGCTAA
 
Protein sequence
MSIPRKRRST GKVTIADVAQ LAGVGTMTVS RALRTPEQVS DKLREKIEAA VHELGYMPNL 
AASALASASS HTIAMVVPNL AEAGCSEMFA GLQQILQPAG YQIMLAESQH RVEQEEKLLE 
TLLASNIAAA ILLSVEHSTT VRQWLKNASI PVMEMGAIRS DPIDMNIGID NVAAMYELTE 
MLIQRGYQNI GLLCANQEQW IFQQHLHGWY KAMLRHHMSP NRVINAALPP NFSTGASQLP 
EFLLAWPELD ALVCVSDELA CGALYECQRR RIKVPDDLAV VGFGDSDVSR VCQPPLTTMT 
VPHRKIGSEA GRALLERLNQ GNWSDRKSIA SSLCMRESC