Gene SeHA_C2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2569 
Symbol 
ID6488788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2484882 
End bp2485820 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content53% 
IMG OID642742749 
ProductHTH-type transcriptional regulator PecT 
Protein accessionYP_002046383 
Protein GI194450747 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00146874 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATG CAAATCGTCC GATAATTAAC CTCGATCTCG ATCTGCTGAG AACGTTCGTG 
GCCGTTGCCG ATCTGAACAC CTTCGCCGCG GCGGCGGCGG CGGTATGTCG TACTCAGTCT
GCGGTCAGTC AGCAAATGCA GCGTCTTGAG CAACTCGTGG GAAAGGAATT GTTCGCCCGC
CATGGTCGTA ACAAGCTTTT GACCGAACAC GGTATCCAGC TTCTGGGGTA CGCCAGAAAA
ATCCTGCGTT TTAATGATGA GGCGTGTTCA TCATTAATGT TCAGTAATCT TCAGGGAGTG
TTAACAATTG GCGCTTCTGA TGAATCAGCT GATACTATCC TGCCTTTTTT GCTTAGCCGA
ATCAGCTCGG TTTATCCGAA ACTCGCGCTT GATGTACGGG TAAAACGCAA CGCCTATATG
GTGGACATGG TTAAATCGCA GGAAGTAGAT TTGGTGGTGA CGACTAACCA ACCTCATTCG
CTGGACTGTC TGAATTTGCG GACCTCGCCC ACCCATTGGT ATTGTGCGGC TGAGTATGTT
TTGCAAAGGG GAGAGCCCGT ACCATTAGTC CTGCTGGACG ATCCCAGCCC ATTCCGCGAT
ATGGTGCTGG AGACGCTAAA TGCAGCGGGT ATTCCCTGGC GGCTGGCCTA TGTGGCGTCT
ACATTACCGG CGGTACGCGC GGCCGTTAAA GCCGGTCTTG GCGTAACGGC TCGACCTGTC
GAAATGATGA GTCCCGACCT TCGCGTGCTG GGCGCCGCAG ACGAATTACC GCCTTTGCCG
GATACGGAAT ATCTGTTGTG CCGCGATCCC AATAGCCAGA ACGAGCTGGC GATGGTGATT
TTCCATGCGA TGGAAAGCTA TCAAAACCCA TGGCATTACA ACCAGTTTTC TGCAGAGGGC
GGAGATGATC CGCTGATGGT GGAAGGGGGT TTTGAGTAG
 
Protein sequence
MINANRPIIN LDLDLLRTFV AVADLNTFAA AAAAVCRTQS AVSQQMQRLE QLVGKELFAR 
HGRNKLLTEH GIQLLGYARK ILRFNDEACS SLMFSNLQGV LTIGASDESA DTILPFLLSR
ISSVYPKLAL DVRVKRNAYM VDMVKSQEVD LVVTTNQPHS LDCLNLRTSP THWYCAAEYV
LQRGEPVPLV LLDDPSPFRD MVLETLNAAG IPWRLAYVAS TLPAVRAAVK AGLGVTARPV
EMMSPDLRVL GAADELPPLP DTEYLLCRDP NSQNELAMVI FHAMESYQNP WHYNQFSAEG
GDDPLMVEGG FE