| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2509 |
|---|
| Symbol | |
|---|
| ID | 6487608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 2414871 |
|---|
| End bp | 2417540 |
|---|
| Gene Length | 2670 bp |
|---|
| Protein Length | 889 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642742689 |
|---|
| Product | phosphotransfer intermediate protein in two-component regulatory system with RcsBC |
|---|
| Protein accession | YP_002046323 |
|---|
| Protein GI | 194447891 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.256279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 0.164014 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGT CTGACACAAC GGTCTCTACC CGATTCTCCC TTCTACCGGG AAGCATTACC
CGTTTCTTCT TATTGCTGAT CATTGTGCTG CTGGTAACGA TGGGCGTTAT GGTACAGAGC
GCCGTCAACG CCTGGTTGAA AGACAAAAGC TATCAAATTG TCGATATCAC CCACGCTATT
CATAAACGCG TGGATACCTG GCGGTATGTT ACCTGGCAAA TTTATGACAA CATCGCCGCG
ACCACTACGC CATCGACAGG TGAAGGACTT CAGGAAACGC GTCTGAAGCA GGATGTGTAT
TATCTTGAAA AGCCGCGACG TAAAACTGAA GCGCTGATTT TCGGTTCCCA TGACAGCGCC
ACGCTGGAAA TGACGCAGCG TATGTCAACT TATCTGGATA CGCTGTGGGG CGCGGAAAAC
GTGCCGTGGT CCATGTATTA CCTCAACGGA CAGGATAACA GCCTGATTCT TATCTCTACC
CTACCGTTGA AAGATCTCTC TTCCGGCTTT AAAGAGTCCA CTATTGGCAA TATCGTCGAT
TCCCGCCGGG CAGAGATGTT GCAGCAGGCG AATGCGCTGG ATGAGCGCGA AAGTTTCTCC
TCATTGCGAA AACTGGCCTG GCAAAACGGT CACTATTTTA CGCTGCGCAC GACCTTCAAT
CAGCCAGGAC ATCTGGCAAC CGTGGTGGCG TTTGATCTGC CCATTAATGA TTTAATCCCG
CCGGGAATGC CGCTGGACAG TTTTCGGATA GAGCCTGACG CAACCCAAGC GACGGGGCGA
AGCAGTGAAA AGGAAGCGCC TGATAGCGTC ACGATTAGCT TTAACGGTTC AAAAATTGAG
ATCTCCTCAG CGCTTAACTC TACCGGAATG CGCCTGATCT GGCAGGTACC GTTCGGTACG
CTTTTGCTTG ATACGTTGCA AAATATTTTG CTGCCTTTAC TGCTGAACAT CGGGCTGCTG
GCGTTGGCGT TATTTGGCTA CGCCACGTTC CGTCATCAGC CGGGACGGTC GACGGAATCG
ACATCCGGCA ACGCGGCGAA TAATGAGCTT CGCGTCTTAC GCGCCATTAA TGAAGAGATA
GTTTCTCTGC TGCCGCTGGG TCTGCTGGTC TACGATCAGG AAGGCAACCG CACCGTGATC
AGCAATAAAA TCGCCGATCA TCTGTTGCCG CATCTTAACC TGCAAAATAT TACCAGCATG
GCGGAACAGC ATCAGGGCGT GATTCAGGCG ACAATTAATA ACGAACTGTA TGAGATCCGT
CTGTTTCGCA GCCAGATCGC TCCCCGCACG CAGATCTTTA TTATTCGCGA TCAGGACCGG
GAAGTGCTGG TGAATAAGAA GCTTAAACAG GCGCAGCGTT TGTATGAGAA GAATCAGCAG
GGCCGCGCCG CCTTTATGCA AAATATCAGC AACACGCTTA AAGAGCCCGT ACGCCAACTG
GCGGTTAACG CCGCAGCAGT CACCACGCCG GAAAGCCTGA AACTGGCGGA TCAGGCGGAT
GTATTGGTAC GTATGATCGA TGAAATCCAA CTGGCGAATA TGCTGGAAAA TGACGCATGG
AAGAGCGAAG CCACGCTGTT CTCCCTGCAG GATCTTATTG ACGAAGTCGT GCCGGAAGTG
CTGCCCGCCA TTAAGCGTAA AGGGCTGCAA CTGCTGATTA ATAACCATCT TAGCGGCAAC
GATGAACGCT GGGGCGATCG TGACGCCCTG CGCCGGATTT TGCTGCTGTT GATTCAGTAT
GCCGTCACAA CGACCGCTAT GGGTAAAATT ACGCTTGAAG TCGAGCAGGA TGAATCTATC
GCGGAGCGTC TGACTTTCCG TATTCTGGAT ACGGGCGAAG GTGTAACGTT AAACGAGATT
GATAATCTGC ATTTCCCGTA TATGAATGAA ACGCAGGGCG ATCGTTACGG CAAAGCGAAT
CCGCTCACCT TCTGGCTGTG CAATCAACTG GCGCGCAAAC TGGGCGGTCA TCTCAACATT
AAAGCGCGAG AAACGCTGGG CACGCGCTAT ACCGTTCATG TCAAAATGCT TCCTCACGAT
CAGCATACTC AGGTCGAAGA GCGCCTGCTG GACGACGTGA GCGTGATGGT CGATGTGACG
TCCAACGAGG TTCGCGCGAT TGTGCTGCGT CAGTTAGAAA ACTGGGGCGC CACCTGCATC
ACGCCGGATG AAAGGCAGAT AAGTCAAGAA TATGATCTCT TTTTAACGGA TAATCCGTCT
AATCTTACTG CCTCGGGCTT GCTTTTAAGC GATGATGAGT CAGGCGTGCG GAAAATTGGC
CCGGGTCAGT TGCGCGTCAA CTTTAATATG AGCAATGCTA TGCAGGAAGC TGTACTACAA
CTTATCGAAG AGCAGCTGGC GCAGGAAGAG ATTCCCGCCT CCCCGCTCGG CGGAGATGAA
AATGCCGAGC TTCATGCCAG CGGCTATTAT GCGCTATTTG TAGACACAGT ACCGGATGAT
GTTAAGAGGT TGTATACTGA GGCGGCAACC AGCGATTTCG CTGCGCTGGC CCAAACGGCC
CACCGCCTGA AAGGGGTGTT TGCCATGCTT AATCTGGTAC CCGGCAAGCA GTTATGTGAA
ACGCTGGAAC ATCTGATTCG TGAGAAAGAT GCTCCAGGTA TAGAAAAATA TATCAGCGAC
ATTGACGCCT ACGTCAAAAG CTTGCTGTAG
|
|---|
| Protein sequence | MSQSDTTVST RFSLLPGSIT RFFLLLIIVL LVTMGVMVQS AVNAWLKDKS YQIVDITHAI
HKRVDTWRYV TWQIYDNIAA TTTPSTGEGL QETRLKQDVY YLEKPRRKTE ALIFGSHDSA
TLEMTQRMST YLDTLWGAEN VPWSMYYLNG QDNSLILIST LPLKDLSSGF KESTIGNIVD
SRRAEMLQQA NALDERESFS SLRKLAWQNG HYFTLRTTFN QPGHLATVVA FDLPINDLIP
PGMPLDSFRI EPDATQATGR SSEKEAPDSV TISFNGSKIE ISSALNSTGM RLIWQVPFGT
LLLDTLQNIL LPLLLNIGLL ALALFGYATF RHQPGRSTES TSGNAANNEL RVLRAINEEI
VSLLPLGLLV YDQEGNRTVI SNKIADHLLP HLNLQNITSM AEQHQGVIQA TINNELYEIR
LFRSQIAPRT QIFIIRDQDR EVLVNKKLKQ AQRLYEKNQQ GRAAFMQNIS NTLKEPVRQL
AVNAAAVTTP ESLKLADQAD VLVRMIDEIQ LANMLENDAW KSEATLFSLQ DLIDEVVPEV
LPAIKRKGLQ LLINNHLSGN DERWGDRDAL RRILLLLIQY AVTTTAMGKI TLEVEQDESI
AERLTFRILD TGEGVTLNEI DNLHFPYMNE TQGDRYGKAN PLTFWLCNQL ARKLGGHLNI
KARETLGTRY TVHVKMLPHD QHTQVEERLL DDVSVMVDVT SNEVRAIVLR QLENWGATCI
TPDERQISQE YDLFLTDNPS NLTASGLLLS DDESGVRKIG PGQLRVNFNM SNAMQEAVLQ
LIEEQLAQEE IPASPLGGDE NAELHASGYY ALFVDTVPDD VKRLYTEAAT SDFAALAQTA
HRLKGVFAML NLVPGKQLCE TLEHLIREKD APGIEKYISD IDAYVKSLL
|
|---|
| |