| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2491 |
|---|
| Symbol | ccmD |
|---|
| ID | 6490303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 2398971 |
|---|
| End bp | 2399144 |
|---|
| Gene Length | 174 bp |
|---|
| Protein Length | 57 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642742672 |
|---|
| Product | heme exporter protein CcmD |
|---|
| Protein accession | YP_002046306 |
|---|
| Protein GI | 194448020 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3114] Heme exporter protein D |
|---|
| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 0.0106744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGGT ACGCCTTTTT TGTCTGGCTG GCGGTGGCGA TGACCGTGGC GCCGCTGGCG
CTGCTGGCGC TGCACACGGT GCTGCAGCGC CGGGCCATTC TGCGCGGCGT GGCGCAGCAG
CGGGCGCGCG AGGCGCGGAT GCGTGCCGCA CAGGCGCAAC AGGAGGCCGC GTGA
|
|---|
| Protein sequence | MGGYAFFVWL AVAMTVAPLA LLALHTVLQR RAILRGVAQQ RAREARMRAA QAQQEAA
|
|---|
| |