Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2479 |
Symbol | |
ID | 6490452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2388465 |
End bp | 2390831 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642742661 |
Product | hypothetical protein |
Protein accession | YP_002046295 |
Protein GI | 194448161 |
COG category | [S] Function unknown |
COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.869607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.03769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTTC ATATTGGAAG CGGATGTCTT CCCGCCACCA TCAGTAATCG CCGCATTTAT CGTATTGCCT GGTCTGATAC CCCCCCTGAA ATGAGTTCCT GGGAAAAAAT GAAGGAATTT TTTTGCTCAA CGCACCAGAC TGAAGCGCTG GAGTGCATCT GGACGATTTG TCACCCGCCG GCCGGAACGA CGCGGGAGGA TGTGATCAAC AGATTTGAAC TGCTCAGGAC GCTCGCGTAT GCCGGATGGG AGGAAAGCAT TCATTCCGGC CAGCACGGGG AAAATTACTT CTGTATTCTG GATGAAGACA GTCAGGAGAT ATTGTCAGTC ACCCTTGATG ATGCCGGGAA CTATACCGTA AATTGCCAGG GGTACAGTGA AACACATCGC CTCACCCTGG ACACAGCACA GGGTGAGGAG GGCACAGGAC ACGCGGAAGG GGCATCCGGG ACATTCAGGA CATCCTTCCT CCCTGCCACA ACGGCTCCAC AGACGCCAGC AGAGTATGAT GCTGTCTGGT CAGCGTGGAG AAGGGCTGCA CCCGCAGAAG AGTCACGCGG CCGTGCAGCA GTGGTACAGA AAATGCGTGC CTGCCTGAAT AATGGCAATG CAGTGCTTAA CGTGGGAGAA TCAGGTCTTA CCACCTTGCC AGACTGTTTA CCCGCGCATA TTACCACACT GGTTATTCCT GATAATAATC TGACCAGCCT GCCGGCGCTG CCGCCAGAAC TGCGGACGCT GGAGGTCTCT GGTAACCAGC TGACTAGCCT GCCGGTGCTG CCGCCAGGAC TACTGGAACT GTCGATCTTT AGTAACCCGC TGACCCACCT GCCGGCGCTG CCGTCAGGAC TATGTAAGCT GTGGATCTTT GGTAATCAAC TGACCAGCCT GCCGGTGTTG CCGCCAGGGC TACAGGAGCT GTCGGTATCT GATAACCAAC TGGCCAGCCT GCCGGCGCTG CCGTCAGAAT TATGTAAGCT GTGGGCCTAT AATAACCAGC TGACCAGCCT GCCGATGTTG CCGTCAGGGC TACAGGAGCT GTCGGTATCT GATAACCAAC TGGCCAGCCT GCCGACGCTG CCGTCAGAAT TATATAAGCT GTGGGCCTAT AATAATCGGC TGACCAGCCT GCCGGCGTTG CCGTCAGGAC TGAAGGAGCT GATTGTATCT GGTAACCGGC TGACCAGTCT GCCGGTGCTG CCGTCAGAAC TGAAGGAGCT GATGGTATCT GGTAACCGGC TGACCAGCCT GCCGATGCTG CCGTCAGGAC TACTGTCGCT GTCGGTCTAT CGTAACCAGC TGACCCGCCT GCCGGAAAGT CTCATTCATC TGTCTTCAGA GACAACCGTA AATCTGGAAG GGAACCCACT GTCTGAACGT ACTTTGCAGG CGCTGCGGGA GATCACCAGC GCGCCTGGCT ATTCAGGCCC CATAATACGA TTCGATATGG CGGGAGCCTC CGCCCCCCGG GAAACTCGGG CACTGCACCT GGCGGCCGCT GACTGGCTGG TGCCTGCCCG GGAGGGGGAA CCGGCTCCTG CAGACAGATG GCATATGTTC GGACAGGAAG ATAACGCCGA CGCATTCAGC CTCTTCCTGG ACAGACTGAG TGAGACGGAA AACTTCATAA AGGACGCGGG GTTTAAGGCA CAGATATCGT CCTGGCTGGC ACAACTGGCT GAAGATGAGG CGTTAAGAGC AAACACCTTT GCTATGGCAA CAGAGGCAAC CTCAAGCTGC GAGGACCGGG TCACATTTTT TTTGCACCAG ATGAAGAACG TACAGCTGGT ACATAATGCA GAAAAAGGGC AATACGATAA CGATCTCGCG GCGCTGGTTG CCACGGGGCG TGAGATGTTC CGTCTGGGAA AACTGGAACA GATTGCCCGG GAAAAGGTCA GAACGCTGGC TCTCGTTGAT GAAATTGAGG TCTGGCTGGC GTATCAGAAT AAGCTGAAGA AATCACTCGG GCTGACCAGC GTGACGTCAG AAATGCGTTT CTTTGACGTA TCCGGCGTGA CGGTTACAGA CCTTCAGGAC GCGGAGCTTC AGGTGAAAGC CGCTGAAAAA AGCGAGTTCA GGGAGTGGAT ACTGCAGTGG GGGCCGTTAC ACAGAGTGCT GGAGCGCAAA GCGCCGGAAC GCGTTAACGC GCTTCGTGAA AAGCAAATAT CGGATTATGA GGAAACGTAC CGGATGCTGT CTGACACAGA GCTGAGACCG TCTGGGCTGG TCGGTAATAC CGATGCAGAG CGCACTATCG GAGCAAGAGC GATGGAGAGC GCGAAAAAGA CATTTTTGGA TGGCCTGCGA CCTCTTGTGG AGGAGATGCT GGGGAGCTAT CTGAACGTTC AGTGGCGTCG TAACTGA
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Protein sequence | MPFHIGSGCL PATISNRRIY RIAWSDTPPE MSSWEKMKEF FCSTHQTEAL ECIWTICHPP AGTTREDVIN RFELLRTLAY AGWEESIHSG QHGENYFCIL DEDSQEILSV TLDDAGNYTV NCQGYSETHR LTLDTAQGEE GTGHAEGASG TFRTSFLPAT TAPQTPAEYD AVWSAWRRAA PAEESRGRAA VVQKMRACLN NGNAVLNVGE SGLTTLPDCL PAHITTLVIP DNNLTSLPAL PPELRTLEVS GNQLTSLPVL PPGLLELSIF SNPLTHLPAL PSGLCKLWIF GNQLTSLPVL PPGLQELSVS DNQLASLPAL PSELCKLWAY NNQLTSLPML PSGLQELSVS DNQLASLPTL PSELYKLWAY NNRLTSLPAL PSGLKELIVS GNRLTSLPVL PSELKELMVS GNRLTSLPML PSGLLSLSVY RNQLTRLPES LIHLSSETTV NLEGNPLSER TLQALREITS APGYSGPIIR FDMAGASAPR ETRALHLAAA DWLVPAREGE PAPADRWHMF GQEDNADAFS LFLDRLSETE NFIKDAGFKA QISSWLAQLA EDEALRANTF AMATEATSSC EDRVTFFLHQ MKNVQLVHNA EKGQYDNDLA ALVATGREMF RLGKLEQIAR EKVRTLALVD EIEVWLAYQN KLKKSLGLTS VTSEMRFFDV SGVTVTDLQD AELQVKAAEK SEFREWILQW GPLHRVLERK APERVNALRE KQISDYEETY RMLSDTELRP SGLVGNTDAE RTIGARAMES AKKTFLDGLR PLVEEMLGSY LNVQWRRN
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