| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2434 |
|---|
| Symbol | |
|---|
| ID | 6489387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 2344140 |
|---|
| End bp | 2346092 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642742617 |
|---|
| Product | colicin I receptor |
|---|
| Protein accession | YP_002046252 |
|---|
| Protein GI | 194448544 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 0.198809 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAG TTACGTTGGC CTGGCCGGTT GCCGCGGCAA CGGATGATGG TGAAACCATG
GTCGTTACCG CGTCCGCCAT CGAACAAAAT CTGAAAGATG CGCCAGCAAG TATCAGCGTC
ATTACCCAGC AAGATTTACA GCGCAGGCCC GTGCAAAACC TGAAAGATGT CCTGAAAGAG
GTGCCGGGCG TACAGCTCAC TAACGAAGGG GATAACCGTA AAGGCGTGAG TATTCGTGGT
CTGGACAGCA GTTATACGCT GATCCTGATC GACGGTAAGC GCGTTAACTC CCGTAACGCG
GTCTTCCGCC ATAATGATTT TGATCTGAAC TGGATACCGG TTGACGCTAT CGAACGTATT
GAAGTGGTGC GTGGCCCCAT GTCCTCGCTG TATGGCTCCG ATGCGCTGGG CGGCGTGGTC
AACATTATCA CCAAAAAAAT TGGTCAGAAA TGGCACGGCA GCGTCACGGT TGACTCCACT
ATTCAGGAAC ATCGCGACCG TGGCGATACC TATAACGGTC AGTTCTTTAC CAGCGGTCCG
CTGATCGACG GCGTGCTGGG AATGAAAGCC TACGGTAGCC TGGCGAAACG CGAAAAAGAC
GAGCAGCAGA GTTCCGCCAC CACCGCTACG GGTGAAACGC CGCGCATTGA AGGATTTACC
AGCCGGGATG GAAACGTCGA GTTTGCCTGG ACACCAAACG AAAATCATGA CGTTACCGCA
GGCTACGGTT TTGATCGCCA GGACCGGGAC TCCGACTCGC TGGATAAAAA CCGACTGGAA
CGGCAAAACT ACGCGTTGAG CCATAACGGA CGTTGGGATC TCGGCAACAG CGAGCTCAAG
TTCTACGGCG AAAAAGTGGA AAACAAAAAC CCCGGCAACA GTAGCCCTAT CACGTCAGAA
AGCAATTCGA TTGACGGGAA ATACGTTCTG CCGTTAGCGG CTGTCAACCA GTTCCTTACC
TTCGGCGGCG AATGGCGTCA CGATAAACTG AGCGATGCGG TGAACCTGAC CGGCGGTTCC
AGTACTAAAA CCTCCGCCAG CCAGTATGCT CTGTTCCTTG AAGATGAGTG GCGCATCTTC
GAACCGCTGG CGCTGACCAC CGGTATTCGT ATGGATGACC ATGAAACCTA TGGCGATCAC
TGGAGCCCGC GTGCTTATCT GGTCTATAAC GCAACGGATA CCCTGACGGT GAAAGGTGGG
TGGGCCACGG CCTTTAAAGC GCCGTCGCTA TTGCAATTAA GTCCGGACTG GGCGACCAAC
TCCTGCCGTG GCGGATGCCG CATTATCGGT AGCCCGGATC TGAAACCTGA AACCAGTGAA
AGCTGGGAGC TCGGCCTTTA TTACCGTGGC GAAGAAGGCA TACTGGAGGG CGTGGAAGCG
AGCGTTACCA CGTTCCGTAA CGATGTGGAC GATCGCATCA GCATTAGCCG TACCCCTGAC
GTTAACGCCG CGCCCGGCTA TTCCAACTTT GTCGGTTTCG AAACCAACAG TCGGGGACAG
CGCGTTCCGG TCTTCCGTTA TTACAACGTG AATAAAGCGC GTATTCAGGG CGTGGAAACC
GAGTTGAAAG TTCCGTTTAA CGAGGCGTGG AAACTGTCGT TGAATTACAC CTATAACGAC
GGGCGCGACG TCAGTAATGG CGGGAACAAG CCGCTTTCCG ATCTGCCGTT CCACACCGCG
AACGGTACGC TGGACTGGAA ACCGGTGCAG CTCGAAGACT GGTCATTCTA CGTATCAGGG
AATTATACCG GGCGTAAGCG GGCCGACAGC GCAACAGCGA AAACGCCGGG CGGGTACGTG
GTCTGGGATA CCGGCGCGGC ATGGCAGGCG ACGAAAAACG TTAAACTGCG TGCGGGCGTT
CTGAACGTGG GCGATAAAGA TCTCAAACGC GACGACTACG GTTATACCGA AGACGGACGT
CGTTACTTTA TGGCGGTGGA TTACCGTTTC TGA
|
|---|
| Protein sequence | MSAVTLAWPV AAATDDGETM VVTASAIEQN LKDAPASISV ITQQDLQRRP VQNLKDVLKE
VPGVQLTNEG DNRKGVSIRG LDSSYTLILI DGKRVNSRNA VFRHNDFDLN WIPVDAIERI
EVVRGPMSSL YGSDALGGVV NIITKKIGQK WHGSVTVDST IQEHRDRGDT YNGQFFTSGP
LIDGVLGMKA YGSLAKREKD EQQSSATTAT GETPRIEGFT SRDGNVEFAW TPNENHDVTA
GYGFDRQDRD SDSLDKNRLE RQNYALSHNG RWDLGNSELK FYGEKVENKN PGNSSPITSE
SNSIDGKYVL PLAAVNQFLT FGGEWRHDKL SDAVNLTGGS STKTSASQYA LFLEDEWRIF
EPLALTTGIR MDDHETYGDH WSPRAYLVYN ATDTLTVKGG WATAFKAPSL LQLSPDWATN
SCRGGCRIIG SPDLKPETSE SWELGLYYRG EEGILEGVEA SVTTFRNDVD DRISISRTPD
VNAAPGYSNF VGFETNSRGQ RVPVFRYYNV NKARIQGVET ELKVPFNEAW KLSLNYTYND
GRDVSNGGNK PLSDLPFHTA NGTLDWKPVQ LEDWSFYVSG NYTGRKRADS ATAKTPGGYV
VWDTGAAWQA TKNVKLRAGV LNVGDKDLKR DDYGYTEDGR RYFMAVDYRF
|
|---|
| |