Gene SeHA_C2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2431 
Symbol 
ID6492365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2340270 
End bp2341637 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content54% 
IMG OID642742614 
ProductL-serine ammonia-lyase 
Protein accessionYP_002046249 
Protein GI194448139 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.386335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGTT GCCTTGATAT ATTCAAAATA GTAATAGGTC CATCCAGCTC ACGTACCGTA 
GGGCCGATGC GCGCCGCCTG TCACTTTATT TCATTGCTCA GAGAACAAGA GACGTTGCCG
CTAATTCGGG AAATTGAAAT CGAGCTGTAT GGCGCGTTAT CGTTAAGCCG CAAGTGCCAC
AATGTGGATA CCGCCCTTTA TCTTGGGCTG CTGGGTTGCC AGCCGGAGAA TGTCGATCTC
CGTTCGCATA TGGCGGTGAT TAAGCGTGCG GAAAATGAAA ACAAAATCGA ACTCCCGCTC
TCCGACGCGG GCGGAATCAC GATAAAAGTC AAGATTATAG CTAATCACCA GGCGCATCCA
GGCCATCCTT ATGCCATGAC GTTTCGCGCC AGGGATGATT ATTTTACGGT GTATGAAGAG
ACCTGGTTTT CTACCGGCGC CGGGCAGGTT CGTAAACATG GCGAGCCGCT GACGCCATCG
CTTCCTTTGC GTACAGTGTC GCCCTTTGAA TTTAGTCATG CCGCGCAGTT GCTGGCGCTG
TGTCGGCGTA ACGGCCTGTC CGTGGCGGCG CTGATGATGA AAAATGAGCT GTGCCGCCAC
TCGCCACAGA CGTTGCAGAA TTATCTGGCG CAAATATGGG ACGTGATGCA GCAGGCGGTT
TATCGCGGCC TGCATACTGA GGGGGTATTA CCCGGTCCCT ATCAGGTACC GCGGCGCGCC
TGTGCGTTAC ATAAGACGTT ACAGGTTAAC CGCTCCGCCA GCGATTTTTT AACCGCGCTG
AACTGGGTCA ATGCCTTCGC GATTGCGGTA AGCGAAGAAA ATGCCAGCGG CGGACAGATT
GTTACCGCGC CAACCAATGG CGCGTGCGGC ATCATTCCGG CAGCGCTCTG CTGGTATGAT
AAATTTGTCA CGCCGCTGGA GCCCGGTGCT CTGACCCGTT TCTTCCTGAC CGCCGCCGCT
ATCGCGATAT TGTTTAAACA AAACGCCTCT ATTCTGGGAT CTGAAGTTGG CTGTCAGGGG
GAAATCGGCG TGGCGTGCTC AATGGCGGCG GCGGGCCTGG CTGAACTGAT GGGCGCATCC
GTGGAGCAAA CGCTGAGCGC CGCTGAAATT GCCATGGAAC ATCATCTGGG ATTGACCTGC
GATCCGCTGG GCGGGCAGGT ACAAATTCCC TGCATAGAGA GAAATGCCAT CTCTGCCGTG
AAAGCGATAA ACGCGGCGAC GATGGCGATG AGTCGCGTAA GTGAACCCTG TATCTCGCTC
GATGAGATCA TTGCTGCGAT GTACGAGACC GGTAAAGACA TGAGCGCTAA ATACCGTGAA
ACGTATCATG GTTCGCTGGG GAAAATTCAG CCGCGCAAGA GAGGGTAA
 
Protein sequence
MESCLDIFKI VIGPSSSRTV GPMRAACHFI SLLREQETLP LIREIEIELY GALSLSRKCH 
NVDTALYLGL LGCQPENVDL RSHMAVIKRA ENENKIELPL SDAGGITIKV KIIANHQAHP
GHPYAMTFRA RDDYFTVYEE TWFSTGAGQV RKHGEPLTPS LPLRTVSPFE FSHAAQLLAL
CRRNGLSVAA LMMKNELCRH SPQTLQNYLA QIWDVMQQAV YRGLHTEGVL PGPYQVPRRA
CALHKTLQVN RSASDFLTAL NWVNAFAIAV SEENASGGQI VTAPTNGACG IIPAALCWYD
KFVTPLEPGA LTRFFLTAAA IAILFKQNAS ILGSEVGCQG EIGVACSMAA AGLAELMGAS
VEQTLSAAEI AMEHHLGLTC DPLGGQVQIP CIERNAISAV KAINAATMAM SRVSEPCISL
DEIIAAMYET GKDMSAKYRE TYHGSLGKIQ PRKRG