Gene SeHA_C2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2399 
Symbol 
ID6488211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2307663 
End bp2308580 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content55% 
IMG OID642742583 
Productamine ABC transporter periplasmic amine-binding protein 
Protein accessionYP_002046218 
Protein GI194449886 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.271335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCT CAAAGCTATG GGTAAGTTCG CTGGCGTTGC TGGCGACGGT GAGTTTACCT 
CTACAGGCGG CATCGCCCGT GACGGTCGGG TCAAAGATTG ATACCGAAGG CGCACTGCTC
GGCAACATGA TTTTGCAGGT ACTGGAAAGC CACGGCGTTA AAACGGTCAA TAAAATTCAG
CTCGGGACGA CGCCAGTCGT TCGTGGCGCG ATTACCGCCG GAGAGCTGGA TATCTATCCG
GAATACACCG GTAACGGGGC GTTCTTTTTT AAAGATGAAA ACGATCCGGC ATGGAAAAAT
GCAAAGCAAG GCTTTGAGAA AGTCAAAAAA CTGGATGCGG AGCAGAATAA GCTGGTCTGG
TTGACGCCTG CGCCGGCCAA CAACACCTGG ACCATCGCGA TACGTCAGGA CATCGCGGAA
AAAAATAAAC TCTCCTCGCT TGCCGATCTC AGCCGTTATC TGAAAGAGGG CGGCACTTTT
AAACTGGCGG CGTCTGCGGA ATTTATCGAA CGGGCGGATG CGCTGCCGGC ATTTGAAAAA
GCCTATGATT TTACCTTGAA TCAGAACCAG CTCTTGTCGC TGGCGGGCGG CGATACGGCG
GTCACGATCA AAGCCGCCGC GCAACAAACA TCCGGCGTTA ACGCCGCGAT GGCGTATGGC
ACCGACGGCC CGGTCGCCGC GCTGGGTCTG CAAACCCTGA GCGACCCGAA AGGCGTCCAG
CCTATCTATG CCCCCGCGCC GGTAGTGCGT GAATCGGTGT TACAGGCCTA TCCGCAGATA
GCCGACTGGC TGCAGCCCGT TTTCGCCAGC CTTGATGAGA AAACGCTGCA ACAGTTGAAC
GCCAGAATCG CCGTAGAAGG GCTGGATGCG AAAAAAGTCG CCGCAGATTA CCTCCGACAA
AAAGGGTGGG TGAAGTAA
 
Protein sequence
MTISKLWVSS LALLATVSLP LQAASPVTVG SKIDTEGALL GNMILQVLES HGVKTVNKIQ 
LGTTPVVRGA ITAGELDIYP EYTGNGAFFF KDENDPAWKN AKQGFEKVKK LDAEQNKLVW
LTPAPANNTW TIAIRQDIAE KNKLSSLADL SRYLKEGGTF KLAASAEFIE RADALPAFEK
AYDFTLNQNQ LLSLAGGDTA VTIKAAAQQT SGVNAAMAYG TDGPVAALGL QTLSDPKGVQ
PIYAPAPVVR ESVLQAYPQI ADWLQPVFAS LDEKTLQQLN ARIAVEGLDA KKVAADYLRQ
KGWVK