Gene SeHA_C2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2398 
Symbol 
ID6491203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2306490 
End bp2307659 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content59% 
IMG OID642742582 
Productinner membrane ABC transporter permease YehY 
Protein accessionYP_002046217 
Protein GI194451668 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0918369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATG CTGCCAAAAA AATTACGGTT AATCGTGTGC TGTTGCTGTT GGTTGTTCTG 
ACCCTGCTTG CTGTCGCGCT ACCTTTCATT AATTACGCCC CGAATCGTCT GGTGAGCGGC
GAGGGGCGCC AGTTATGGGA GATCTGGCCG GCGACCATCT GGATGCTGAC TGGCGCGGGA
TGCGCGCTGT TTACGTTGTG CTTTGTACCC GGTAAACGCG GTAGCGTACT GACGCTGATG
ATGGCGCAGA CGCTTTTTAT TGTCATGCTG TGGGGAGTCG GCAGGGCGGC GACCCAGTTG
GCGCAGGAGG GCAGCCCGCT GGCGCGTACC AGTCTGGGAA GTGGATTGTG GCTGGGCCTC
GGTCTGATGC TGCTGGCCTG TAGCGATGCG ATCCGCCGTA TTACCGTTGG GCCGCTGTGG
CGCTGGTTGC TGCACGCGCA AATTGTCATT GTCCCGCTGG CGCTGCTGTT TTCAGGCACG
TTCGACAACC TCTCGCTTCT GAAAGAGTAT ACCAACCGCC AGGATGTTTT CGATGCCGCG
CTGGTGCAAC ATTTAATGTT ACTGGCGGGC ACGGTGCTGC CGGCGCTGGC GATCGGACTA
CCGTTGGGCG TCTGGTGTTA TTTTTCCGCC TCACGCCAGG GGCCGGTGTT TACCGTACTG
AATGTGATCC AGACTATTCC TTCCGTCGCG CTGTTTGGCC TGCTGATCGC GCCGTTGGCC
GGGCTGGTGA AACAGTTTCC GTGGCTTGCC GAATTCGGCG TCGCGGGAAC CGGCATGACG
CCTGCGCTGA TAGCGCTGGT GCTCTATGCG TTATTGCCGC TGGTGCGCGG CGTGGTCGCC
GGGCTCAATC AGGTGCCGCG CGATGTGCTG GAGAGCGCAA GAGCCATGGG AATGAGTAGC
GGCCAGCGCT TCAGGCATGT GCAACTGCCG CTGGCGCTGC CGGTCTTTTT ACGTAGCCTG
AGGGTAGTCA TGGTCCAGAC AGTGGGAATG GCCGTCGTCG CCGCGCTGAT TGGCGCGGGA
GGTTTCGGCG CGCTGGTGTT TCAGGGGCTA TTGAGCAGCG CCATTGATTT AGTCCTGTTG
GGCGTCATTC CGGTGATTGC GCTGGCGGTA GTGATCGACG CGCTGTTTGA TTTATGGATC
GCGTTTTTGA AGGGAGCAAC CGATGATTGA
 
Protein sequence
MSDAAKKITV NRVLLLLVVL TLLAVALPFI NYAPNRLVSG EGRQLWEIWP ATIWMLTGAG 
CALFTLCFVP GKRGSVLTLM MAQTLFIVML WGVGRAATQL AQEGSPLART SLGSGLWLGL
GLMLLACSDA IRRITVGPLW RWLLHAQIVI VPLALLFSGT FDNLSLLKEY TNRQDVFDAA
LVQHLMLLAG TVLPALAIGL PLGVWCYFSA SRQGPVFTVL NVIQTIPSVA LFGLLIAPLA
GLVKQFPWLA EFGVAGTGMT PALIALVLYA LLPLVRGVVA GLNQVPRDVL ESARAMGMSS
GQRFRHVQLP LALPVFLRSL RVVMVQTVGM AVVAALIGAG GFGALVFQGL LSSAIDLVLL
GVIPVIALAV VIDALFDLWI AFLKGATDD