Gene SeHA_C2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2397 
Symbol 
ID6491110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2305550 
End bp2306497 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content58% 
IMG OID642742581 
Productglycine betaine/carnitine/choline transport ATP-binding protein opuCA 
Protein accessionYP_002046216 
Protein GI194450052 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAT TTAACCATGT TAGTAAAACC TTCGGCGATC AACAGGCTGT TAGCGACCTC 
AATTTGCACT TTAGCGAAGG CAGCTTTTCG GTGTTAATTG GCACCTCCGG TTCGGGAAAA
TCGACCACTC TGAAGATGAT TAACCGGCTG GTAGAGCATG ATAGCGGAAC GATCCGTTTT
GCCGGGGAAG AGATCCGCAG CCTGCCGGTG CTTGAACTGC GTCGTCGCAT GGGCTATGCC
ATTCAGTCTA TCGGCCTTTT TCCCCACTGG ACGGTGGCGC AAAATATCGC CACCGTACCG
CAACTACAAA AGTGGTCGCG TGCACGGATT AACGATCGTA TTGACGAACT GATGGCATTA
TTGGGTCTGG AAAGCGCGCT GCGCGATCGC TATCCGCATC AGCTTTCCGG CGGGCAACAG
CAGCGGGTCG GCGTTGCGCG GGCGCTGGCT GCCGATCCGC AGGTATTGCT GATGGACGAG
CCTTTCGGCG CGCTTGATCC GGTAACGCGC GGCGCATTGC AGCAGGAGAT GACCCGCATT
CATCAGCTGC TGGGGCGCAC CATCGTACTG GTGACGCACG ACATCGACGA GGCGCTACGC
CTCGCCGACC ATCTGGTGCT GATGGACGGG GGCCACGTTA TCCAACAGGG ATCGCCGCTT
TCTATGCTGA CCTCGCCGGA AAATGATTTC GTGCAGGCAT TTTTTGGCCG CAGCGAGCTG
GGCGTAAGGC TGCTTTCGTT ACGTAACGTA GGCGATTATG TACGTCGGCA TGAACAGCTC
AGCGGCGACG CGCTGGTGGA AGAGATGACG CTACGCGATG CGCTATCGAT GTTTGTCGCC
CGTCGGTGCG ACGTCCTGCC GGTGGCGAAT CAGCAGGGCG AGCCCTGCGG TACGCTCCAT
TTCCGCGATC TGCTTTCGGA GACGTCCCCC CGTGAAACGA CTGTGTGA
 
Protein sequence
MIEFNHVSKT FGDQQAVSDL NLHFSEGSFS VLIGTSGSGK STTLKMINRL VEHDSGTIRF 
AGEEIRSLPV LELRRRMGYA IQSIGLFPHW TVAQNIATVP QLQKWSRARI NDRIDELMAL
LGLESALRDR YPHQLSGGQQ QRVGVARALA ADPQVLLMDE PFGALDPVTR GALQQEMTRI
HQLLGRTIVL VTHDIDEALR LADHLVLMDG GHVIQQGSPL SMLTSPENDF VQAFFGRSEL
GVRLLSLRNV GDYVRRHEQL SGDALVEEMT LRDALSMFVA RRCDVLPVAN QQGEPCGTLH
FRDLLSETSP RETTV