| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2384 |
|---|
| Symbol | |
|---|
| ID | 6492421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 2291443 |
|---|
| End bp | 2293932 |
|---|
| Gene Length | 2490 bp |
|---|
| Protein Length | 829 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642742568 |
|---|
| Product | fimbrial usher protein |
|---|
| Protein accession | YP_002046203 |
|---|
| Protein GI | 194450978 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3188] P pilus assembly protein, porin PapC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0771751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAGGA TGACGCCCAT CGCTTCGCTT GTTTTATTGA CTCTGTTTAC CTGGCAAACG
CAGGCTATCG CGACGGAAAC GTTTGATACC CATTTTATGG TGGGGGGAAT GAGAGATCAA
AAAATAACAA ATTTCCATCT GGATGAGAAT AAGCCAATTC CGGGACAGTA CGAACTGGAT
ATTTATGTCA ACAATCAATG GCGAGGTAAA TACGATATCA TTGTTGCCGA TGATCCCGGT
AGCACGTGTA TTTCAACTGA GTTGTTGAAA AATATTGGTG TGATAAGCGA TGGTCTGCAA
CCGCAGGGAG CAACGGATTG TATTGCGTTA AAAGATGTCG TGAGAAGCGG TGGCTATACT
TTTAATATTG GCGTTTTTCG GCTGGATTTG AGCGTTCCCC AGGCCTATGT AAATGAGGTC
GAGGCGGGTT ATGTATTGCC TGAAAACTGG GATCGCGGCA TCAATGCATT TTATACTTCT
TACTATGCCA GCCAGTATTA CAGTGACTAT AAGAATTCTG GCAGTAGTGA AAGTACTTAC
GTTCGGTTCA ATAGCGGTTT CAATCTGTTG GGCTGGCAAG CGCATGCGGA TACCACATTT
AATAAAACCG ATGGCAGCAG CGGTGAGTGG AAAAGCAACA CATTGTATCT GGAGCGCGGT
ATCGCTGAGC TCCTCGGCAC ATTACGCGCC GGGGATCAGT ATACCTCGTC AGAGATTTTT
GATTCTGTGA GATTTACCGG CGTTCGCCTG TTCCGCGATA TGCAAATGTT GCCAAACTCG
AAACAGAATT TTACGCCGTT GGTGCAGGGG ATTGCACAGA CTAACGCTTT GGTAACCATC
GAACAGAACG GATTCGTTGT TTATCAGAAA GAGGTTCCTC CTGGCCCCTT TTCCATTGCG
GATCTGCAAC TCGCGGGCGG TGGCGCGGAT CTTGATGTCA CCGTGCGTGA GGCGGATGGT
TCGATAAATA CCTGGCTGGT GCCTTACGCT TCCGTACCGA ACATGTTGCA GCCTGGCGTC
TCTAAGTATG ATTTTTCCGC CGGCCGTAGT CATATTGAAG GCGCCGATAA TCAGGCCGAT
TTTACACAAA TCAGTTATCA GTATGGCCTT AATAACCTGT TGACGCTTTA TGGCGGTACG
ATGCTATCGA ACCATTATAA TGCGTTTACC CTCGGCACGG GGTGGAATAC CCGGATTGGC
GCCATTTCGC TTGACGCTAC GCGAGCGCAC AGTAAACAGG ATAATGGCGA TGTATTTGAT
GGTCAGAGTT ATCAGATTGC TTATAATAAA TACCTGACCC AAACATTAAC TCGGTTTGGT
CTGGCTGCGT ATCGGTATTC ATCACAGGAT TACCGCACAT TTAACGATCA TGTCTGGGCC
AATAATAAAA ATAACTATCG TCGCGATAAG AATGATGTAT ACGATATTGC TGATTATTAT
CAAAACGATT TTGGGCGTAA AAATACGTTT TCAGCTAATG TGAGCCAATC CTTGCCAGAA
GGATGGGGCG CAGTATCACT GAGTGCATTA TGGCGTGATT ACTGGGGACG TAGCGGCACC
AGTAAAGATT ATCAAATAAG CTATTCCAAT ACGTTCCAGA AAATTAATTA TACGTTATCC
GCCAGTCAGA CTTACGACGA GGATCATAAT GAAGATAAAC GTTTTAACCT GTTTATTTCA
ATTCCCTTTG ACTGGGGGGA CGGTATTACT ACCCCGCGGC GTCATCTGAA TGTGTCGAAC
TCGACGACCT TTGATGATGA TGGATTTACC TCAAACAATA TTGGTTTAAC CGGTACGGCA
GGCAGTCGCG ATCAATTTAA TTACGGCGTG AATGTTAGTC ATCAGCGACA GGATAGTGAG
ACCACAGCGG GGACGAATTT AACCTGGAAT ACGCCCGTTG CAACGCTTAA TGGTAGTTAC
AGCCAGTCGT CCAATTATAC TCAGACCGGC GGAAGTATTT CCGGTGGGGT TGTAGCCTGG
AGTGGCGGGT TGAATTTATC CAGCCGGCTT TCAGATACCT TTGCGATTAT GCAGGCTCCG
GGACTTGAAG GAGCCTACGT TAACGGCCAA AAATATCGGA CCACCAATAA AAAAGGAACG
GTGGTTTATG ACAACCTTAC GCCATATCGC GAAAACCATC TTATGCTTGA TGTGTCGCAA
AGTAGCAGTG AAACGGAATT ACGCGGTAAC CGTAAAGTTG CCGCCCCGTA CCGAGGGGCC
GTCGTGCTAG TGAATTTTGA TACCGACCAG CGTAAACCAT GGTTTATTAA AGCGCAGCGT
CCTGATGGTT CGCCTCTTAT TTTTGGTTAT GATGTAGTAG ATCATCATGG TCATAATGTG
GGCATTGTTG GACAAGGTAG TCAGCTATTT ATTCGAACGA ATGATATTCC GCCCGAAGTC
AGTGTACCAG TAGATAAAGA GCAGGGGCTT TCATGTTCAA TCACCTTTGG TAAAACGGTT
GATGAAAGTA AAGTTTATAT TTGTCGGTAG
|
|---|
| Protein sequence | MLRMTPIASL VLLTLFTWQT QAIATETFDT HFMVGGMRDQ KITNFHLDEN KPIPGQYELD
IYVNNQWRGK YDIIVADDPG STCISTELLK NIGVISDGLQ PQGATDCIAL KDVVRSGGYT
FNIGVFRLDL SVPQAYVNEV EAGYVLPENW DRGINAFYTS YYASQYYSDY KNSGSSESTY
VRFNSGFNLL GWQAHADTTF NKTDGSSGEW KSNTLYLERG IAELLGTLRA GDQYTSSEIF
DSVRFTGVRL FRDMQMLPNS KQNFTPLVQG IAQTNALVTI EQNGFVVYQK EVPPGPFSIA
DLQLAGGGAD LDVTVREADG SINTWLVPYA SVPNMLQPGV SKYDFSAGRS HIEGADNQAD
FTQISYQYGL NNLLTLYGGT MLSNHYNAFT LGTGWNTRIG AISLDATRAH SKQDNGDVFD
GQSYQIAYNK YLTQTLTRFG LAAYRYSSQD YRTFNDHVWA NNKNNYRRDK NDVYDIADYY
QNDFGRKNTF SANVSQSLPE GWGAVSLSAL WRDYWGRSGT SKDYQISYSN TFQKINYTLS
ASQTYDEDHN EDKRFNLFIS IPFDWGDGIT TPRRHLNVSN STTFDDDGFT SNNIGLTGTA
GSRDQFNYGV NVSHQRQDSE TTAGTNLTWN TPVATLNGSY SQSSNYTQTG GSISGGVVAW
SGGLNLSSRL SDTFAIMQAP GLEGAYVNGQ KYRTTNKKGT VVYDNLTPYR ENHLMLDVSQ
SSSETELRGN RKVAAPYRGA VVLVNFDTDQ RKPWFIKAQR PDGSPLIFGY DVVDHHGHNV
GIVGQGSQLF IRTNDIPPEV SVPVDKEQGL SCSITFGKTV DESKVYICR
|
|---|
| |