Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2351 |
Symbol | |
ID | 6489057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 2256113 |
End bp | 2259109 |
Gene Length | 2997 bp |
Protein Length | 998 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642742539 |
Product | mase1 domain family protein |
Protein accession | YP_002046174 |
Protein GI | 194450932 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3447] Predicted integral membrane sensor domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.659224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTAATGA GTAAACCATC CCAACATGTT TTCGTTACCG TCCCCCACCC GCTATTGCGT CTGGTCAGTT TAGGCCTGGT CGCGTTTGTC TTTACGCTCT TTTCGCTCGT ATTATCGCGT GTCGGCACCC AACTCGCGCC GCTGTGGTTC CCCACCTCCA TTATGATGGT CGCGTTTTAC CGCCATGCGG GCCGTCTGTG GCCTGGGATC GCGGTCGCCT GCTCGCTCGG CAGCATCGGC GCCTCACTGA CTTTATTTCC GGCCGCCTCG CTTAACTTTA GCTGGACGGC AATAAATATT ATCGAGGCGG CCACTGGCGC GATACTGCTG CGAAAACTGC TCCCCAGCTA CAACCCCTTA CAAAATTTGA ATGACTGGTT TCGTCTGGCT ATCGGCAGCG CCGTGATTCC GCCGCTACTC GGCGGCCTGT TATTTTGGCT GATAGCGCCG GAAGCGGTCG CCTCGAAAGC GTTTCTGATT TGGGTATTAT CGGAAGCCAT CGGCGCGCTG ACGCTGGTGC CGTTAGGTTT ACTGTTTAAA CCACACTATC TATTGCGTCA TCGCGACCCG CATCTGTTGC TGGAAACGCT ATTGACGCTG GTCATTACGC TGGCGCTAAG CTGGCTCGCT ATGCGCTATA TTCCGTGGCC GTTTACGTGC GTTATCGTCC TGTTGATGTG GAGTGCGGTG CGCCTGCCGC GAATGGAGGC GTTTTTAATT TTTTTAGCTA CCGTTATCGT GGTCTCGCTC ATGCTGGCCA ATGACCCCAC GCTGCTCGCC ACGCCGAAAA CCGACGTGAT GGTCAATATG CCGTGGCTGC CTTTTTTAAT GATCCTGCTG CCTGCCAATA TGATGACGAT GGTGATGTAC GCGTTTCGCA CGGAACGCAA ACATATCACC GAGAGCGAAT CCCGCTTTCG CAACGCGATG GAGTATTCCG CCATTGGTAT GGCGCTGGTC GGTACGGAGG GTCAGTGGCT ACAGGTCAAT AAATCTCTGA GCCATTTTCT TGGCTATAGC CAGGATGAAT TACGCACGAT GACATTTCAG CAATTGACCT GGCCGGAAGA CCTGAATAAC GACCTTGAAC AGCTAAACAT GCTGGTGCGC GGCGACATCA ATAGCTATTC CATGGAAAAA CGCTACTACA CCCGCAACGG CGATATCGTC TGGGCGCTGC TGGCCGTCTC GCTGGTTCGT CATAAAGACA ATAAACCTCT CTATTTTATT GCTCAGATTG AAGATATTAA CGATCTCAAG CAAAGCGAGC AGGAAAACCA GCGGTTGATG GAACGTATTA CACAAGCGAA CGACGCGCTG TTTCAGGAAA AAGAACGGTT GCACATCACG CTTGACTCTA TCGGAGAAGC GGTGGTGTGT ATTGATGTCG CGATGAATAT CACCTTTATG AACCCGATCG CCGAGAAGAT GAGCGGCTGG CGGCAAGAGG ATGCTTTAGG CGCGCCATTA TTAACGGTTC TGCGCATTAC GTCAGGTGAT AAGGGGCCGC TGCTGGAGGA TATTTATCGC GCCGACAGGT CGCGATCGGA CATGGAACAG GAGATAGTGC TCCATTGTCA TAACGGCGGT AGCTACGATA TTCATTACAG TATCACGCCG CTCAGTACGC TTGACGGCGA TAAGATTGGT TCGGTTCTGG TTATCCAGGA CGTTACCGAA TCACGAAAAA TGTTACGCCA GCTCAGCTAC AGCGCAACGC ATGACGCCCT CACCCATCTT GCCAACCGCG CCAGTTTTGA AAAGCAGCTG CAACAGCGCC TGCAAACAAT ACAGGAATCG CCTCAACATC ATGCGCTGGT GTTTATCGAT CTGGACCGTT TTAAAGCGGT TAACGACAGC GCGGGACATG CCGCCGGCGA TGCCTTATTG CGCGAGCTCG CGTCACTGAT GCTCAGTATG CTTCGCTCCG GCGATCTCCT GGCCCGTCTG GGTGGCGATG AGTTTGGCCT GTTGCTGCCG GATTGTAATA GTGACAGCGC GCGCTTTATC GTGACGCGGC TTATCAACGC CGTTAATGAG TATCACTTTA TGTGGGAAGG ACGCCTGCAT CGGATCGGCG CCAGCGCCGG GATCACCATG ATAAATGAAC ATAACTGCCA GCTCACAGAG GTCATGTCTC AGGCCGATAT TGCCTGCTAC GCCGCGAAAA ATAGCGGTCG AGGCCGTCTG ACCGTGTACG AACCGCAGCA CGCATTAACC TCCTCAAAGG GAATGATGCC GCTGGAAGAA CAGTGGCATA TGATTAAAAA TAACCACCTG CTAATGCTTG CCAGAAACGT CGCGCCGCCG CGTACGCCGG AGGCCACCAG CTTTTGGCTG GTCTCACTCA GGCTGTGGAC CAGCGAAGGG GAAGTGTTGG AAGAGCGCGC GTTCCGGGCA GGGTTAGCCG ACTCCGCGCT GCATCACGCG CTTGACCGAC GGGTATTCCA TGAGTTTTTC CACCATGCGG CGACCGCCGT CGCCAGCAAG GGATTAAGCG TTGCGCTGCC GCTGTCCGCC GCAGGATTAT ACAGCGCGAC CCTTATTGAT GAGCTGCTGG AACAACTGGA GCATAGCCCA CTGCCGCCAC GGTTATTACA TCTGATTATC CCGGCTGACG TTATCGTTAA GCAGGCGCAG ACCGCCGCTG CGACTCTGCG AAAACTGCGG CAACGCGGCT GCCAGGTGAT TCTCAGCCAT GTCGGGCGCG ATTTACAGCT GTTTAATTTA CTGCCCCCGC ATATCGTCGA TTATTTACTG CTGGATAGCG ACCTTATCGC CAACGTTCAT GAAAGTTTAA TGGATGAAAT GCTGACCTCG ATCATCCAGG GACACGCCCA GCATCTGGAC ATCAAAACGC TCGCCGGGCC GGTACAAAAC CCACAGGTGC TGGATACGCT CTCCCGTATT GGCGTGGATC TGATTTATGG CGACACTATC GCCGAAGCGC AACCGCTGGA TTTGTTACTG AATACCAGTT ACTTCGCTAT CCATTGA
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Protein sequence | MVMSKPSQHV FVTVPHPLLR LVSLGLVAFV FTLFSLVLSR VGTQLAPLWF PTSIMMVAFY RHAGRLWPGI AVACSLGSIG ASLTLFPAAS LNFSWTAINI IEAATGAILL RKLLPSYNPL QNLNDWFRLA IGSAVIPPLL GGLLFWLIAP EAVASKAFLI WVLSEAIGAL TLVPLGLLFK PHYLLRHRDP HLLLETLLTL VITLALSWLA MRYIPWPFTC VIVLLMWSAV RLPRMEAFLI FLATVIVVSL MLANDPTLLA TPKTDVMVNM PWLPFLMILL PANMMTMVMY AFRTERKHIT ESESRFRNAM EYSAIGMALV GTEGQWLQVN KSLSHFLGYS QDELRTMTFQ QLTWPEDLNN DLEQLNMLVR GDINSYSMEK RYYTRNGDIV WALLAVSLVR HKDNKPLYFI AQIEDINDLK QSEQENQRLM ERITQANDAL FQEKERLHIT LDSIGEAVVC IDVAMNITFM NPIAEKMSGW RQEDALGAPL LTVLRITSGD KGPLLEDIYR ADRSRSDMEQ EIVLHCHNGG SYDIHYSITP LSTLDGDKIG SVLVIQDVTE SRKMLRQLSY SATHDALTHL ANRASFEKQL QQRLQTIQES PQHHALVFID LDRFKAVNDS AGHAAGDALL RELASLMLSM LRSGDLLARL GGDEFGLLLP DCNSDSARFI VTRLINAVNE YHFMWEGRLH RIGASAGITM INEHNCQLTE VMSQADIACY AAKNSGRGRL TVYEPQHALT SSKGMMPLEE QWHMIKNNHL LMLARNVAPP RTPEATSFWL VSLRLWTSEG EVLEERAFRA GLADSALHHA LDRRVFHEFF HHAATAVASK GLSVALPLSA AGLYSATLID ELLEQLEHSP LPPRLLHLII PADVIVKQAQ TAAATLRKLR QRGCQVILSH VGRDLQLFNL LPPHIVDYLL LDSDLIANVH ESLMDEMLTS IIQGHAQHLD IKTLAGPVQN PQVLDTLSRI GVDLIYGDTI AEAQPLDLLL NTSYFAIH
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