Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2323 |
Symbol | rfbB |
ID | 6490787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2225114 |
End bp | 2226199 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642742512 |
Product | dTDP-glucose 4,6 dehydratase |
Protein accession | YP_002046147 |
Protein GI | 194449636 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.00762462 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAAGATAC TTATTACTGG CGGGGCAGGT TTTATTGGAT CAGCTGTTGT CCGCCATATT ATTAAGAATA CACAGGACAC TGTAGTTAAT ATTGATAAAT TAACCTACGC CGGTAATCTT GAATCCCTTT CTGATATTTC TGAAAGTAAT CGCTACAATT TTGAACACGC GGATATTTGT GATTCCGCTG AAATAACGCG TATTTTTGAG CAGTACCAGC CGGACGCGGT GATGCATTTG GCTGCGGAAA GTCATGTGGA CCGTTCGATT ACCGGGCCAG CAGCATTTAT TGAAACCAAT ATCGTCGGCA CCTATGCACT TCTTGAAGTT GCGCGTAAAT ACTGGTCTGC CCTTGGCGAA GATAAAAAAA ATAATTTTCG TTTTCATCAT ATTTCCACTG ATGAAGTTTA CGGCGATTTA CCGCATCCTG ATGAAGTTGA AAACAGCGTT ACGCTGCCGT TATTTACTGA AACGACGGCA TATGCGCCAA GTAGCCCCTA TTCTGCGTCA AAAGCATCCA GCGATCATTT AGTCCGTGCC TGGCGGCGTA CCTATGGTCT ACCAACGATC GTTACCAATT GTTCTAATAA CTATGGCCCT TATCACTTCC CTGAAAAACT GATTCCGTTG GTCATTTTGA ACGCACTGGA AGGAAAGCCT TTGCCAATTT ATGGCAAAGG GGATCAGATT CGCGATTGGC TATATGTAGA AGATCATGCT CGCGCGCTTC ATATGGTAGT GACTGAAGGC AAGGCAGGGG AGACTTATAA CATTGGTGGA CACAATGAGA AGAAAAATCT CGATGTGGTA TTTACCATCT GTGATCTGCT GGATGAGATT GTACCCAAAG CGACTTCTTA TCGTGAACAA ATCACTTATG TCGCGGATCG TCCGGGCCAT GATCGTCGTT ATGCCATTGA TGCAGGTAAA ATTAGCCGCG AATTAGGCTG GAAACCGCTG GAGACCTTTG AAAGCGGTAT TCGTAAAACA GTGGAATGGT ACCTTGCAAA TACTCAATGG GTAAACAATG TTAAAAGTGG GGCGTATCAG AGTTGGATAG AACAGAACTA TGAAGGACGC CAGTAA
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Protein sequence | MKILITGGAG FIGSAVVRHI IKNTQDTVVN IDKLTYAGNL ESLSDISESN RYNFEHADIC DSAEITRIFE QYQPDAVMHL AAESHVDRSI TGPAAFIETN IVGTYALLEV ARKYWSALGE DKKNNFRFHH ISTDEVYGDL PHPDEVENSV TLPLFTETTA YAPSSPYSAS KASSDHLVRA WRRTYGLPTI VTNCSNNYGP YHFPEKLIPL VILNALEGKP LPIYGKGDQI RDWLYVEDHA RALHMVVTEG KAGETYNIGG HNEKKNLDVV FTICDLLDEI VPKATSYREQ ITYVADRPGH DRRYAIDAGK ISRELGWKPL ETFESGIRKT VEWYLANTQW VNNVKSGAYQ SWIEQNYEGR Q
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