Gene SeHA_C2322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2322 
SymbolrfbD 
ID6490637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2224215 
End bp2225114 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content50% 
IMG OID642742511 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002046146 
Protein GI194448060 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0148362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCT TACTTTTTGG TAAGACAGGG CAAGTAGGCT GGGAGTTGCA ACGTTCTCTG 
GCACCGGTAG GGAATCTGAT TGCCCTGGAT GTCCATTCAA AAGAGTTTTG CGGTGATTTT
AGTAATCCGA AAGGCGTTGC CGAAACCGTT CGTAAGCTTC GTCCCGATGT GATTGTTAAC
GCAGCAGCCC ATACTGCAGT AGATAAAGCA GAGTCTGAAC CAGAACTGGC GCAGTTACTT
AACGCCACCA GTGTGGAAGC CATCGCTAAA GCAGCCAACG AAACTGGCGC ATGGGTAGTG
CATTATTCAA CCGATTATGT ATTTCCTGGT ACCGGCGATA TCCCATGGCA GGAAACGGAC
GCTACGTCGC CGCTGAATGT CTATGGCAAA ACCAAACTGG CGGGAGAAAA GGCCCTGCAG
GATAACTGCC CTAAACACCT TATCTTCCGC ACCAGTTGGG TTTATGCAGG TAAGGGCAAT
AATTTCGCAA AGACAATGCT TCGTCTGGCG AAAGAGCGTC AGACACTTTC AGTCATTAAC
GATCAGTACG GTGCGCCAAC CGGTGCGGAA TTACTGGCTG ACTGTACGGC GCATGCGATC
CGTGTGGCGT TAAATAAACC AGAAGTCGCA GGTCTTTACC ATCTGGTTGC CGGGGGAACC
ACAACCTGGC ATGACTACGC GGCCTTAGTC TTTGACGAGG CGCGCAAAGC AGGGATAACG
CTTGCGCTGA CTGAGCTTAA TGCTGTGCCG ACCAGCGCCT ACCCGACGCC GGCGAGCAGA
CCAGGCAATT CGCGTCTCAA TACTGAAAAG TTTCAGCGTA ATTTTGACCT TATTCTGCCT
CAATGGGAAT TAGGAGTTAA GCGTATGCTG ACTGAAATGT TTACGACGAC AACCATCTAA
 
Protein sequence
MNILLFGKTG QVGWELQRSL APVGNLIALD VHSKEFCGDF SNPKGVAETV RKLRPDVIVN 
AAAHTAVDKA ESEPELAQLL NATSVEAIAK AANETGAWVV HYSTDYVFPG TGDIPWQETD
ATSPLNVYGK TKLAGEKALQ DNCPKHLIFR TSWVYAGKGN NFAKTMLRLA KERQTLSVIN
DQYGAPTGAE LLADCTAHAI RVALNKPEVA GLYHLVAGGT TTWHDYAALV FDEARKAGIT
LALTELNAVP TSAYPTPASR PGNSRLNTEK FQRNFDLILP QWELGVKRML TEMFTTTTI