Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2322 |
Symbol | rfbD |
ID | 6490637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2224215 |
End bp | 2225114 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642742511 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_002046146 |
Protein GI | 194448060 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.0148362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATATCT TACTTTTTGG TAAGACAGGG CAAGTAGGCT GGGAGTTGCA ACGTTCTCTG GCACCGGTAG GGAATCTGAT TGCCCTGGAT GTCCATTCAA AAGAGTTTTG CGGTGATTTT AGTAATCCGA AAGGCGTTGC CGAAACCGTT CGTAAGCTTC GTCCCGATGT GATTGTTAAC GCAGCAGCCC ATACTGCAGT AGATAAAGCA GAGTCTGAAC CAGAACTGGC GCAGTTACTT AACGCCACCA GTGTGGAAGC CATCGCTAAA GCAGCCAACG AAACTGGCGC ATGGGTAGTG CATTATTCAA CCGATTATGT ATTTCCTGGT ACCGGCGATA TCCCATGGCA GGAAACGGAC GCTACGTCGC CGCTGAATGT CTATGGCAAA ACCAAACTGG CGGGAGAAAA GGCCCTGCAG GATAACTGCC CTAAACACCT TATCTTCCGC ACCAGTTGGG TTTATGCAGG TAAGGGCAAT AATTTCGCAA AGACAATGCT TCGTCTGGCG AAAGAGCGTC AGACACTTTC AGTCATTAAC GATCAGTACG GTGCGCCAAC CGGTGCGGAA TTACTGGCTG ACTGTACGGC GCATGCGATC CGTGTGGCGT TAAATAAACC AGAAGTCGCA GGTCTTTACC ATCTGGTTGC CGGGGGAACC ACAACCTGGC ATGACTACGC GGCCTTAGTC TTTGACGAGG CGCGCAAAGC AGGGATAACG CTTGCGCTGA CTGAGCTTAA TGCTGTGCCG ACCAGCGCCT ACCCGACGCC GGCGAGCAGA CCAGGCAATT CGCGTCTCAA TACTGAAAAG TTTCAGCGTA ATTTTGACCT TATTCTGCCT CAATGGGAAT TAGGAGTTAA GCGTATGCTG ACTGAAATGT TTACGACGAC AACCATCTAA
|
Protein sequence | MNILLFGKTG QVGWELQRSL APVGNLIALD VHSKEFCGDF SNPKGVAETV RKLRPDVIVN AAAHTAVDKA ESEPELAQLL NATSVEAIAK AANETGAWVV HYSTDYVFPG TGDIPWQETD ATSPLNVYGK TKLAGEKALQ DNCPKHLIFR TSWVYAGKGN NFAKTMLRLA KERQTLSVIN DQYGAPTGAE LLADCTAHAI RVALNKPEVA GLYHLVAGGT TTWHDYAALV FDEARKAGIT LALTELNAVP TSAYPTPASR PGNSRLNTEK FQRNFDLILP QWELGVKRML TEMFTTTTI
|
| |