| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2320 |
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| Symbol | rfbC |
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| ID | 6492577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | - |
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| Start bp | 2222737 |
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| End bp | 2223285 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642742509 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_002046144 |
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| Protein GI | 194451405 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.00610808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGATTGTGA TTAAAACAGC AATACCAGAT GTCTTGATCT TAGAGCCTAA AGTTTTTGGC
GATGAGAGGG GATTCTTTTT TGAAAGTTAT AACCAGCAGA CCTTTGAAGA GTTGATTGGA
CGTAAAGTTA CATTTGTTCA AGATAATCAT TCAAAATCCA AAAAGAACGT ACTCAGAGGG
CTACATTTTC AGAGAGGAGA AAATGCACAG GGGAAGTTAG TTCGTTGTGC TGTCGGTGAG
GTTTTTGATG TTGCGGTCGA TATCCGAAAA GAATCGCCTA CTTTTGGTCA ATGGGTTGGT
GTAAATCTGT CTGCTGAGAA TAAGCGACAG CTTTGGATTC CAGAAGGTTT TGCTCATGGT
TTTGTTACTC TTAGTGAGTA TGCAGAGTTT CTGTACAAAG CAACTAATTA TTACTCACCT
TCATCGGAAG GTAGCATTCT ATGGAATGAT GAGGCAATAG GTATTGAATG GCCTTTTTCT
CAGCTGCCTG AGCTTTCAGC AAAAGATGCT GCAGCACCTT TACTGGATCA AGCCTTGTTA
ACAGAGTAA
|
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| Protein sequence | MIVIKTAIPD VLILEPKVFG DERGFFFESY NQQTFEELIG RKVTFVQDNH SKSKKNVLRG
LHFQRGENAQ GKLVRCAVGE VFDVAVDIRK ESPTFGQWVG VNLSAENKRQ LWIPEGFAHG
FVTLSEYAEF LYKATNYYSP SSEGSILWND EAIGIEWPFS QLPELSAKDA AAPLLDQALL
TE
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