Gene SeHA_C2316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2316 
Symbol 
ID6491306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2218545 
End bp2219858 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content45% 
IMG OID642742505 
Productlipopolysaccharide biosynthesis protein RfbH 
Protein accessionYP_002046140 
Protein GI194451848 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.0335708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAA ATAACCTGCG TGAGCAAATC TCTCAGCTTG TCGCTCAGTA TGCGAATGAG 
GCATTGAGCC CGAAACCTTT TGTTGCAGGT ACAAGCGTTG TGCCTCCTTC CGGGAAGGTT
ATTGGTGCCA AAGAGTTACA ATTGATGGTT GAGGCGTCTC TTGATGGATG GCTAACTACT
GGTCGTTTCA ATGATGCCTT TGAAAAAAAA CTTGGGGAAT TTATTGGGGT TCCTCATGTT
TTAACGACAA CATCTGGCTC TTCGGCAAAC TTGCTGGCAC TGACTGCGCT GACTTCCCCA
AAATTAGGCG AGCGAGCTCT CAAACCTGGT GATGAGGTTA TTACTGTCGC TGCTGGCTTC
CCGACTACAG TTAACCCGGC GATCCAGAAT GGTTTAATAC CGGTATTCGT GGATGTTGAT
ATCCCGACAT ATAATATCGA TGCCTCTCTC ATTGAAGCTG CAGTTACTGA GAAATCAAAA
GCGATAATGA TCGCTCATAC ACTCGGTAAT GCATTTAACC TGAGTGAAGT TCGTCGGATT
GCCGATAAAT ATAACTTATG GTTGATTGAA GACTGCTGTG ATGCCCTTGG GACGACTTAT
GAAGGCCAGA TGGTAGGTAC CTTTGGTGAC ATCGGAACCG TTAGTTTTTA TCCGGCTCAC
CATATCACAA TGGGTGAAGG CGGTGCTGTA TTCACCAAGT CAGGTGAACT GAAGAAAATT
ATTGAGTCGT TCCGTGACTG GGGCCGGGAT TGTTATTGTG CGCCAGGATG CGATAACACC
TGCGGTAAAC GTTTTGGTCA GCAATTGGGA TCACTTCCTC AAGGCTATGA TCACAAATAT
ACTTATTCCC ACCTCGGATA TAATCTCAAA ATCACGGACA TGCAGGCAGC ATGTGGTCTG
GCTCAGTTGG AGCGCGTAGA AGAGTTTGTA GAGCAGCGTA AAGCTAACTT TTCCTATCTG
AAACAGGGCT TGCAATCTTG CACTGAATTC CTCGAATTAC CAGAAGCAAC AGAGAAATCA
GATCCATCCT GGTTTGGCTT CCCTATCACC CTGAAAGAAA CTAGCGGTGT TAACCGTGTC
GAACTGGTGA AATTCCTTGA TGAAGCAAAA ATCGGTACAC GTTTACTGTT TGCTGGAAAT
CTGATTCGCC AACCGTATTT TGCTAATGTG AAATATCGTG TAGTGGGTGA GTTGACAAAT
ACCGACCGTA TAATGAATCA AACGTTCTGG ATTGGTATTT ATCCAGGCTT GACTACAGAG
CATTTAGATT ATGTAGTTAG CAAGTTTGAA GAGTTCTTTG GTTTGAATTT CTAA
 
Protein sequence
MTANNLREQI SQLVAQYANE ALSPKPFVAG TSVVPPSGKV IGAKELQLMV EASLDGWLTT 
GRFNDAFEKK LGEFIGVPHV LTTTSGSSAN LLALTALTSP KLGERALKPG DEVITVAAGF
PTTVNPAIQN GLIPVFVDVD IPTYNIDASL IEAAVTEKSK AIMIAHTLGN AFNLSEVRRI
ADKYNLWLIE DCCDALGTTY EGQMVGTFGD IGTVSFYPAH HITMGEGGAV FTKSGELKKI
IESFRDWGRD CYCAPGCDNT CGKRFGQQLG SLPQGYDHKY TYSHLGYNLK ITDMQAACGL
AQLERVEEFV EQRKANFSYL KQGLQSCTEF LELPEATEKS DPSWFGFPIT LKETSGVNRV
ELVKFLDEAK IGTRLLFAGN LIRQPYFANV KYRVVGELTN TDRIMNQTFW IGIYPGLTTE
HLDYVVSKFE EFFGLNF