Gene SeHA_C2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2313 
Symbol 
ID6489147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2215238 
End bp2216239 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content32% 
IMG OID642742502 
ProductO antigen biosynthesis abequosyltransferase RfbV 
Protein accessionYP_002046137 
Protein GI194448794 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.0297459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATAT CATTTTGTAT TCCAACTTAT AATAGAAAAG AATATCTTGA AGAGTTGTTG 
AATAGTATAA ATAATCAGGA AAAATTTAAT TTAGATATTG AGATATGTAT ATCAGATAAT
GCCTCTACTG ATGGTACAGA GGAAATGATT GATGTTTGGA GGAACAATTA TAATTTCCCA
ATAATATATC GGCGTAATAG CGTTAACCTT GGGCCAGATA GGAATTTTCT TGCTTCAGTA
TCCCTTGCGA ATGGGGATTA TTGTTGGATA TTTGGCAGTG ATGATGCTCT TGCGAAAGAC
TCGTTAGCGA TATTACAAAC TTATCTCGAT TCTCAAGCAG ATATATATTT ATGTGACAGA
AAAGAGACCG GGTGTGATTT AGTTGAGATT AGAAACCCTC ATCGTTCTTG GCTCAGAACA
GATGATGAAC TTTATGTGTT TAATAATAAT TTAGATAGGG AAATCTATCT CAGTAGATGC
TTATCTATTG GTGGTGTATT TAGCTATCTA AGTTCTTTAA TAGTAAAAAA AGAACGATGG
GATGCCATTG ATTTTGATGC GTCCTATATT GGCACTTCCT ATCCTCATGT ATTTATCATG
ATGAGCGTAT TTAATACGCC AGGGTGCCTT TTGCATTATA TATCAAAACC ACTCGTAATA
TGCCGAGGAG ATAATGATAG TTTCGAGAAG AAAGGAAAGG CCAGACGAAT TTTAATTGAT
TTTATTGCAT ATTTAAAATT AGCTAATGAT TTTTACAGTA AAAATATATC TTTAAAACGA
GCATTTGAAA ATGTTTTGCT AAAAGAGAGA CCATGGTTAT ATACAACTTT GGCTATGGCA
TGTTATGGCA ATAGTGATGA AAAAAGAGAT TTATCTGAAT TTTATGCAAA GCTAGGTTGT
AATAAAAATA TGATCAACAC TGTACTTCGA TTTGGGAAAC TAGCATATGC AGTGAAAAAT
ATTACCGTGC TTAAGAATTT TACTAAACGG ATAATTAAGT AG
 
Protein sequence
MLISFCIPTY NRKEYLEELL NSINNQEKFN LDIEICISDN ASTDGTEEMI DVWRNNYNFP 
IIYRRNSVNL GPDRNFLASV SLANGDYCWI FGSDDALAKD SLAILQTYLD SQADIYLCDR
KETGCDLVEI RNPHRSWLRT DDELYVFNNN LDREIYLSRC LSIGGVFSYL SSLIVKKERW
DAIDFDASYI GTSYPHVFIM MSVFNTPGCL LHYISKPLVI CRGDNDSFEK KGKARRILID
FIAYLKLAND FYSKNISLKR AFENVLLKER PWLYTTLAMA CYGNSDEKRD LSEFYAKLGC
NKNMINTVLR FGKLAYAVKN ITVLKNFTKR IIK