| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2260 |
|---|
| Symbol | |
|---|
| ID | 6490232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 2163142 |
|---|
| End bp | 2163936 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642742450 |
|---|
| Product | propanediol diffusion facilitator |
|---|
| Protein accession | YP_002046085 |
|---|
| Protein GI | 194449475 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.394524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.201769 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATT CTCTAAAGGC GCAATGTGGT GCGGAATTTT TAGGCACCGG ACTCTTTTTG
TTTTTTGGTA TCGGTTGTTT GAGCGCGCTC AAAGTCGCAG GCGCCAGCCT CGGATTATGG
GAGATTTGCA TTATTTGGGG GCTTGGGATT TCACTGGCCG TTTACCTTAC GGCCGGCATC
TCCGGCGGAC ATCTTAACCC TGCGGTGACG ATTGCGCTGT GGCTCTTTGC CTGCTTTCCC
AAACAGAAAG TATTGCCTTA TATTATTGCC CAGTTTGCTG GCGCTTTTGG CGGCGCTCTG
CTGGCGTATG TGCTTTATAG TAGCCTTTTT ACTGAATTTG AGACTGCGCA TCATATGGTG
CGCGGTAGCG TCGAAAGTTT GCAATTAGCC AGCATTTTCA GTACCTATCC GGCCGCAGCG
CTAAATGTAT GGCAGGCTGC GTTGGTGGAA GTGGTCATTA CGTCGATTCT GATGGGCATG
ATCATGGCAT TGACGGATGA TGGCAATGGC ATTCCTAAAG GGCCGCTTGC GCCTTTGCTT
ATTGGGATAT TGGTTGCCGT TATCGGCGCG TCTACTGGAC CCCTTACCGG TTTTGCAATG
AACCCGGCGC GTGATTTCGG TCCCAAACTG TTCACATGGT TAGCGGGGTG GGGGAACATG
GCGATGAGCG GTGGGCGAGA GATCCCTTAT TTTATCGTGC CGATTGTCGC GCCTGTTATC
GGCGCCTGTG CCGGAGCAGC CATATATCGC TATTTTATTG GTAAGAATTT ACCTTGTAAC
CGCTGTGAAC TGTAA
|
|---|
| Protein sequence | MNDSLKAQCG AEFLGTGLFL FFGIGCLSAL KVAGASLGLW EICIIWGLGI SLAVYLTAGI
SGGHLNPAVT IALWLFACFP KQKVLPYIIA QFAGAFGGAL LAYVLYSSLF TEFETAHHMV
RGSVESLQLA SIFSTYPAAA LNVWQAALVE VVITSILMGM IMALTDDGNG IPKGPLAPLL
IGILVAVIGA STGPLTGFAM NPARDFGPKL FTWLAGWGNM AMSGGREIPY FIVPIVAPVI
GACAGAAIYR YFIGKNLPCN RCEL
|
|---|
| |