Gene SeHA_C2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2238 
SymbolcobT 
ID6491711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2144918 
End bp2145988 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content59% 
IMG OID642742429 
Productnicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_002046064 
Protein GI194447733 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.173207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAC TACACGCTTT ACTCCGTGAC ATTCCTGCGC CGGACGCCGA GGCGATGGCG 
CGTGCGCAGC AACATATTGA CGGCCTGCTC AAACCGCCGG GCAGCCTGGG CAGACTGGAA
ACCTTAGCCG TTCAGCTCGC GGGTATGCCG GGTCTTAACG GTACGCCGCA GGTAGGTGAA
AAGGCGGTGC TGGTGATGTG CGCCGACCAT GGCGTCTGGG ATGAAGGCGT AGCGGTTTCG
CCCAAAATCG TGACGGCGAT TCAGGCGGCG AATATGACGC GGGGAACAAC CGGCGTATGC
GTGCTTGCCG CTCAGGCCGG TGCGAAGGTG CATGTCATTG ATGTTGGTAT TGATGCCGAA
CCTATTCCTG GCGTAGTTAA TATGCGCGTC GCGCGCGGCT GCGGAAATAT TGCCGTTGGC
CCGGCGATGA GTCGCTTGCA GGCTGAGGCG CTTTTGCTGG AGGTTTCCCG CTACACCTGC
GACCTGGCGC AACGCGGCGT GACCTTATTT GGCGTAGGGG AGCTGGGAAT GGCGAACACT
ACGCCAGCCG CCGCGATGGT CAGCGTTTTT ACAGGAAGTG ATGCAAAAGA GGTGGTGGGG
ATTGGCGCGA ATCTTCCGCC TTCCCGCATC GATAATAAAG TGGACGTCGT GCGGCGGGCG
ATTGCGATTA ATCAGCCCAA TCCGCGCGAT GGCATTGATG TGTTGTCGAA GGTGGGTGGT
TTCGATCTGG TCGGGATGAC CGGCGTGATG CTTGGCGCGG CAAGGTGTGG CTTACCCGTA
TTGCTGGATG GCTTTCTTTC CTACTCGGCA GCGCTGGCGG CCTGTCAGAT TGCGCCTGCG
GTGAGACCTT ATCTGATCCC GTCGCACTTT TCGGCGGAAA AGGGTGCCCG CATCGCGCTC
GCGCATTTGT CTATGGAACC CTATTTGCAT ATGGCGATGC GGTTAGGTGA AGGAAGCGGC
GCGGCGCTGG CGATGCCGAT CGTGGAAGCC GCGTGCGCCA TGTTCCACAA TATGGGGGAG
TTAGCGGCCA GTAATATTGT CCTACCGGAG GGGAACGCAA ACGCAACATA A
 
Protein sequence
MQTLHALLRD IPAPDAEAMA RAQQHIDGLL KPPGSLGRLE TLAVQLAGMP GLNGTPQVGE 
KAVLVMCADH GVWDEGVAVS PKIVTAIQAA NMTRGTTGVC VLAAQAGAKV HVIDVGIDAE
PIPGVVNMRV ARGCGNIAVG PAMSRLQAEA LLLEVSRYTC DLAQRGVTLF GVGELGMANT
TPAAAMVSVF TGSDAKEVVG IGANLPPSRI DNKVDVVRRA IAINQPNPRD GIDVLSKVGG
FDLVGMTGVM LGAARCGLPV LLDGFLSYSA ALAACQIAPA VRPYLIPSHF SAEKGARIAL
AHLSMEPYLH MAMRLGEGSG AALAMPIVEA ACAMFHNMGE LAASNIVLPE GNANAT