Gene SeHA_C2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2212 
Symbol 
ID6491117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2125190 
End bp2126386 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content50% 
IMG OID642742406 
Productouter membrane protein N 
Protein accessionYP_002046046 
Protein GI194451483 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.466216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.580794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA AAGTTCTGGC ACTGCTTGTC CCGGCGTTAT TAGTGGCAGG CGCAGCAAAT 
GCGGCTGAAA TTTATAATAA AAATGGCAAC AAACTCGACC TGTACGGCAA AGTTGATGGT
CTGCGTTACT TCTCTGACAA TGCAGGCGAC GATGGCGACC AGTCCTACGC CCGTATTGGC
TTTAAAGGCG AAACGCAGAT CAACGATATG CTGACCGGCT ATGGTCAGTG GGAATACAAC
ATTAAGGTGA ACACCACCGA AGGCGAAGGT GCAAACTCCT GGACTCGTCT GGGCTTTGCC
GGTCTGAAAT TCGGCGAGTA CGGCTCTTTC GATTATGGCC GTAACTATGG TGTTATCTAC
GACATTGAAG CCTGGACCGA TGCGCTGCCG GAATTCGGCG GTGATACTTA TACCCAGACC
GATGTCTATA TGCTGGGCAG AACCAACGGC GTTGCCACCT ACCGTAATAC CGACTTCTTC
GGTCTGGTGG AAGGCCTGAA CTTCGCGTTG CAGTACCAGG GTAATAACGA AGATCCTGGC
GCAGGCGAAG GAACAGCCAA CGGCAGCGAT GCAAATAGTG GTTCTCGCAA ACTGGCCCGT
GAAAACGGCG ACGGTTTCGG TATGTCTACC TCCTACGACT TTGACTTCGG GTTAAGCCTG
GGTGCGGCCT ACTCTTCCTC TGACCGTACG GACAATCAGG TTACTCGTGG GTATGGTGAT
GGCCATCATT ACTATGCCAA TAGCTATGCC GGCGGTGAAA CTGCCGAAGC CTGGACCGTA
GGTGCCAAAT ATGACGCCTA CAATGTTTAC CTGGCGGCGA TGTACGCTGA AACCCGCAAC
ATGACCTATT ATGGCGGCGG CGATGGCGGT AATGGCGGTA TCGCTAACAA AACCCAGAAC
TTTGAAGTGG TTGCGCAGTA TCAGTTCGAT TTCGGTCTGC GTCCGTCCAT CGCCTACTTG
CAGTCTAAGG GCAAAGATTT AGGCGGCCAG GATAAAGATA GCCGTGGTAA CTATCGTTAC
ACCGACAAAG ATCTGGTTAA ATATGTTGAC GTTGGTATGA CTTACTACTT CAACAAAAAT
ATGTCCACCT ACGTTGATTA TAAAATCAAC CTGCTGGACG AAGATGATGA CTTCTACGCA
AACAACGGTA TTGCAACCGA TGATATCGTA GGTGTTGGTC TGGTCTACCA GTTCTAA
 
Protein sequence
MNRKVLALLV PALLVAGAAN AAEIYNKNGN KLDLYGKVDG LRYFSDNAGD DGDQSYARIG 
FKGETQINDM LTGYGQWEYN IKVNTTEGEG ANSWTRLGFA GLKFGEYGSF DYGRNYGVIY
DIEAWTDALP EFGGDTYTQT DVYMLGRTNG VATYRNTDFF GLVEGLNFAL QYQGNNEDPG
AGEGTANGSD ANSGSRKLAR ENGDGFGMST SYDFDFGLSL GAAYSSSDRT DNQVTRGYGD
GHHYYANSYA GGETAEAWTV GAKYDAYNVY LAAMYAETRN MTYYGGGDGG NGGIANKTQN
FEVVAQYQFD FGLRPSIAYL QSKGKDLGGQ DKDSRGNYRY TDKDLVKYVD VGMTYYFNKN
MSTYVDYKIN LLDEDDDFYA NNGIATDDIV GVGLVYQF