Gene SeHA_C2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2207 
Symbol 
ID6491322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2121498 
End bp2121968 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content56% 
IMG OID642742401 
Productvery short patch repair protein 
Protein accessionYP_002046041 
Protein GI194447370 
COG category[L] Replication, recombination and repair 
COG ID[COG3727] DNA G:T-mismatch repair endonuclease 
TIGRFAM ID[TIGR00632] DNA mismatch endonuclease Vsr 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value0.579149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG TTCACGATAA AGCCACGCGC AGTAAAAATA TGCGCGCGAT AGCGACCCGC 
GATACGGCGA TTGAAAAACG TCTTGCTGGC CTGTTAAGCG CGCAGGGGAT TACGTTTCAT
ACTCAGGACA CGACATTACC GGGCAAGCCG GACTTTGTGG TGAATGACTA TGATTGTGTG
ATTTTTACTC ACGGCTGCTT TTGGCATCAT CACCACTGTT ATCTGTTCAA AGTACCGGCC
ACGCGAACGG CTTTCTGGCT GGAAAAAATC GGTAAGAACG TTGAGCGCGA TGAGCGCGAT
ATTCAGCGTT TACAGGCGCT TGGCTGGCGG GTACTGATCG TCTGGGAGTG CGCCTTGCGC
GGGCGAGCGA AATTGAGCGA CGCGGCGTTG GCGGAGCGCC TGGAAGAGTG GATCTGCGGC
GGCGGCGCCA GCGCGCAGAT CGACACCCAG GGGATTCATC TACTGGCGTG A
 
Protein sequence
MADVHDKATR SKNMRAIATR DTAIEKRLAG LLSAQGITFH TQDTTLPGKP DFVVNDYDCV 
IFTHGCFWHH HHCYLFKVPA TRTAFWLEKI GKNVERDERD IQRLQALGWR VLIVWECALR
GRAKLSDAAL AERLEEWICG GGASAQIDTQ GIHLLA