Gene SeHA_C2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2180 
Symbol 
ID6488197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2101421 
End bp2102626 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content57% 
IMG OID642742375 
Productputative inner membrane protein 
Protein accessionYP_002046015 
Protein GI194447348 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.113022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.0595972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATGGC AACACTTCAA GCAAACCTGG TTAATTAAAT TCTGGGCGCC GGCCCCTGCG 
GTGATCGCAG CCGGCATTCT CTCTACCTAC TATTTTGGCA TCACCGGCAC GTTTTGGGCC
GTGACGGGCG AATTTACCCG CTGGGGCGGG CAAATTTTGC AGCTTTTTGG CGTTCATGCC
GAACAGTGGG GCTACTACAA GTTGATTCAT CTGGAAGGTA CGCCGCTGAC GCGTATCGAC
GGCATGATGA TCCTCGGCAT GTTCGGCGGC TGTTTCGCCG CGGCGCTGTG GGCCAACAAC
GTAAAACTAC GTATGCCGCG CAGCCGAATC CGTATCGTAC AGGCGGTGGT CGGAGGCATG
ATCGCTGGCT TCGGCGCGCG TCTGGCGATG GGGTGTAACC TGGCCGCCTT TTTTACCGGA
ATCCCGCAGT TCTCCCTACA CGCGTGGTTC TTTGCGCTGG CGACCGCTAT CGGCTCCTGG
TTCGGCGCCC GCTTTACGTT GCTGCCGATA TTTCGCATAC CGGTGAAAAT GCAAAAGGTC
TCCGCGGCTT CGCCACTGAC GCAGAAACCG GATCAGGCAA GACGGCGTTT CAGGCTCGGT
ATGCTGGTCT TTATCGGCAT GATTGGCTGG GCGTTATTAA CGGCAATGCA TCAGCCGAAA
CTGGGGCTGG CGATGCTGTT CGGCATCGGG TTTGGGCTGC TGATCGAGCG CGCGCAAATC
TGCTTTACCT CGGCCTTTCG CGATCTGTGG ATCTCCGGAC GCGCCCATAT GGCGAAAGCG
ATTATTTTTG GCATGGCGGT CAGCGCCATT GGTATTTTCA GCTACGTGCA GTTGGGCGTT
GCACCTAAAA TTATGTGGGC TGGCCCGAAT GCGGTCATTG GCGGACTGCT GTTCGGTTTT
GGCATCGTGC TGGCGGGCGG CTGCGAAACC GGCTGGATGT ACCGCGCCGT AGAAGGCCAG
GTGCATTACT GGTGGGTGGG CCTCGGCAAT GTCATCGGTT CGACCATCCT GGCTTACTAC
TGGGATGATT TCGCACCCGC GCTGGCGACC AGTTGGGATA AAGTTAACCT GCTGAATACT
TTTGGTCCGC TGGGCGGTCT GCTGGTCACC TACCTGTTAT TATTTACCGC GCTGATGTTA
ATCATCGGCT GGGAAAAACG TTTTTTCCGC CGTGCGGGGC TGACGCCTGC TAAGGAATCT
GTATGA
 
Protein sequence
MSWQHFKQTW LIKFWAPAPA VIAAGILSTY YFGITGTFWA VTGEFTRWGG QILQLFGVHA 
EQWGYYKLIH LEGTPLTRID GMMILGMFGG CFAAALWANN VKLRMPRSRI RIVQAVVGGM
IAGFGARLAM GCNLAAFFTG IPQFSLHAWF FALATAIGSW FGARFTLLPI FRIPVKMQKV
SAASPLTQKP DQARRRFRLG MLVFIGMIGW ALLTAMHQPK LGLAMLFGIG FGLLIERAQI
CFTSAFRDLW ISGRAHMAKA IIFGMAVSAI GIFSYVQLGV APKIMWAGPN AVIGGLLFGF
GIVLAGGCET GWMYRAVEGQ VHYWWVGLGN VIGSTILAYY WDDFAPALAT SWDKVNLLNT
FGPLGGLLVT YLLLFTALML IIGWEKRFFR RAGLTPAKES V