Gene SeHA_C2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2168 
Symbol 
ID6491929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2090398 
End bp2091384 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content57% 
IMG OID642742364 
ProductD-cysteine desulfhydrase 
Protein accessionYP_002046004 
Protein GI194451517 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID[TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.406051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0000160197 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCACTAC ATCACTTAAC GCGCTTTCCT CGCCTGGAGC TTATTGGCGC GCCGACCCCG 
CTCGAATACC TGCCGCGATT GTCTGATTAT CTTGGCCGTG AGATTTACAT TAAGCGCGAT
GACGTTACGC CCATTGCAAT GGGCGGCAAT AAACTGCGTA AGCTGGAGTT TCTGGTGGCC
GACGCGCTGC GAGAAGGGGC GGATACGCTG ATAACCGCAG GGGCGATTCA GTCGAACCAT
GTCCGTCAGA CGGCGGCGGT CGCGGCCAAA TTGGGGCTGC ATTGCGTCGC TTTGCTGGAA
AATCCAATCG GTACCACCGC GGAAAATTAC CTGACGAATG GTAATCGCCT GTTACTGGAT
TTATTTAATA CGCAAATTGA GATGTGCGAT GCGCTAACCG ATCCGGATGC GCAGCTGCAA
ACGCTGGCGA CGCGCATTGA AGCGCAAGGG TTCAGGCCCT ATGTGATTCC GGTCGGCGGC
TCCAGCGCGC TGGGGGCAAT GGGATACGTA GAGAGCGCCC TGGAAATCGC CCAGCAGTGT
GAAGAAGTTG TCGGGCTCTC TTCGGTGGTG GTGGCCTCCG GCAGCGCCGG AACGCACGCC
GGGTTAGCTG TCGGGCTGGA ACATCTGATG CCTGACGTCG AACTGATTGG CGTGACCGTT
TCACGTTCTG TCGCCGAGCA GAAACCCAAA GTGATTGCCT TGCAGCAGGC TATTGCCGGT
CAGCTGGCGC TGACGGCGAC GGCGGATATT CATTTATGGG ATGACTATTT TGCCCCGGGT
TACGGCGTGC CAAATGACGC GGGGATGGAG GCGGTGAAAC TGCTGGCGAG CCTGGAGGGG
GTGTTGCTGG ATCCGGTATA TACCGGCAAA GCGATGGCGG GTCTGATAGA CGGCATCAGC
CAGAAACGCT TTAACGATGA CGGGCCGATT CTCTTTATTC ACACCGGTGG GGCGCCTGCG
CTGTTTGCCT ACCATCCTCA TGTATAA
 
Protein sequence
MPLHHLTRFP RLELIGAPTP LEYLPRLSDY LGREIYIKRD DVTPIAMGGN KLRKLEFLVA 
DALREGADTL ITAGAIQSNH VRQTAAVAAK LGLHCVALLE NPIGTTAENY LTNGNRLLLD
LFNTQIEMCD ALTDPDAQLQ TLATRIEAQG FRPYVIPVGG SSALGAMGYV ESALEIAQQC
EEVVGLSSVV VASGSAGTHA GLAVGLEHLM PDVELIGVTV SRSVAEQKPK VIALQQAIAG
QLALTATADI HLWDDYFAPG YGVPNDAGME AVKLLASLEG VLLDPVYTGK AMAGLIDGIS
QKRFNDDGPI LFIHTGGAPA LFAYHPHV