Gene SeHA_C2161 details

Gene Information

• Locus tag: SeHA_C2161
• Symbol: uvrC
• ID: 6489061
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Heidelberg str. SL476
• Kingdom: Bacteria
• Replicon accession: NC_011083
• Strand: -
• Start bp: 2084766
• End bp: 2086598
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642742357
• Product: excinuclease ABC subunit C
• Protein accession: YP_002045997
• Protein GI: 194451638
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.138205
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 0.0000000035589
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGAGTGAAA TATTTGACGC AAAGGCGTTT TTGAAAACCG TTACCAGCCA ACCCGGTGTC 
TATCGTATGT ATGACGCCGG CGGTGCGGTT ATTTATGTCG GTAAAGCAAA AGACCTGAAA 
AAGCGTCTTT CCAGCTACTT TCGCAGCAAC CTGGCTTCGC GTAAAACCGA AGCGCTAGTT 
GCGCAAATTC AACACATTGA TGTCACGGTA ACACATACCG AAACGGAAGC GCTGCTGCTT 
GAGCATAATT ACATCAAGTT GTATCAACCG CGTTACAACG TGTTGTTGCG TGATGATAAA 
TCCTATCCTT TTATTTTTCT GAGCGGCGAT ACCCATCCGC GTCTGGCGAT GCACCGTGGC 
GCCAAACATG CGAAAGGCGA GTACTTCGGC CCATTTCCTA ATGGCTATGC CGTGCGGGAA 
ACGCTGGCGC TGTTACAGAA AATTTTCCCT GTCCGCCAGT GCGAAAACAG CGTATATCGC 
AACCGCTCGC GTCCTTGCCT GCAATATCAG ATTGGCCGCT GTTTAGGCCC CTGCGTTGCA 
GGACTGGTCG GCGAGGAGGA GTATGCGCAA CAGGTGGAGT ATGTCCGGTT GTTTTTGTCC 
GGTAAGGACG ACCAGGTCTT AACACAGCTG ATTGCCCGGA TGGAAAAGGC CAGCCAGGAT 
CTGGCATTTG AAGAGGCGGC GCGTATTCGC GATCAGATCC AGGCGGTACG CCGGGTCACG 
GAAAAACAGT TTGTCTCCAA TGCGGGCGAC GATCTCGACG TTATCGGCGT GGCTTTTGAT 
GCGGGTATGG CCTGTGTGCA TGTGCTGTTT ATTCGCCAGG GTAAGGTGCT GGGCAGCCGC 
AGCTATTTTC CAAAAGTACC TGGCGGTACG GAACTGGGCG AAGTGGTGGA AACCTTTGTC 
GGGCAGTTTT ACCTGCAGGG TAGCCAGATG CGCACGCTAC CGGGCGAGAT ACTGCTCGAT 
TTTAATCTGA GTGATAAAAC GCTGCTGGCC GATTCGTTGT CGGAACTTGC CGGACGGCGT 
ATTCATGTCC AGACAAAACC GCGCGGCGAT CGCGCCCGTT ATCTCAAGCT GGCGCGGACC 
AACGCGGCAA CGGCCTTAAT CACTAAACTT TCGCAGCAGT CCACCATCAC GCAGCGTTTG 
ACTGCGCTGG CGGCGGTATT AAAACTTCCT GCGATCAAGC GGATGGAATG TTTTGACATC 
AGCCATACCA TGGGGGAGCA AACGGTCGCA TCCTGTGTGG TATTTGACGC TAACGGGCCG 
TTACGCGCCG AGTATCGTCG TTATAATATC GCGGGCATCA CGCCGGGTGA TGACTATGCG 
GCGATGAATC AGGTGCTACG TCGGCGTTAT GGCAAGGCCA TAGAAGAAAG TAAGATTCCG 
GATGTTATTC TGATCGACGG CGGAAAAGGG CAGCTCGCCC AGGCGAAAGC CGTTTTCGCT 
GAGCTGGATG TCCCCTGGGA TAAGCATCAC CCTTTGCTGC TTGGCGTCGC CAAAGGCGCG 
GACAGAAAGG CCGGTCTGGA AACACTCTTT TTTGAACCGG AAGGCGAGGG GTTTAGCCTG 
CCGCCGGACT CGCCGGCGCT GCATGTTATT CAGCATATTC GCGATGAGTC GCACGATCAC 
GCGATCGGCG GGCACCGTAA AAAACGCGCG AAGGTTAAAA ATACCAGTAC GCTGGAAACT 
ATTGAAGGCG TTGGGCCTAA ACGTCGCCAG ATGCTGCTGA AATATATGGG CGGTTTGCAA 
GGGCTACGTA ACGCCAGCGT AGAAGAAATT GCAAAAGTGC CGGGTATTTC GCAAGGTCTG 
GCAGAAAAGA TCTTCTGGTC GTTGAAACAT TGA 

 

Protein sequence

MSEIFDAKAF LKTVTSQPGV YRMYDAGGAV IYVGKAKDLK KRLSSYFRSN LASRKTEALV 
AQIQHIDVTV THTETEALLL EHNYIKLYQP RYNVLLRDDK SYPFIFLSGD THPRLAMHRG 
AKHAKGEYFG PFPNGYAVRE TLALLQKIFP VRQCENSVYR NRSRPCLQYQ IGRCLGPCVA 
GLVGEEEYAQ QVEYVRLFLS GKDDQVLTQL IARMEKASQD LAFEEAARIR DQIQAVRRVT 
EKQFVSNAGD DLDVIGVAFD AGMACVHVLF IRQGKVLGSR SYFPKVPGGT ELGEVVETFV 
GQFYLQGSQM RTLPGEILLD FNLSDKTLLA DSLSELAGRR IHVQTKPRGD RARYLKLART 
NAATALITKL SQQSTITQRL TALAAVLKLP AIKRMECFDI SHTMGEQTVA SCVVFDANGP 
LRAEYRRYNI AGITPGDDYA AMNQVLRRRY GKAIEESKIP DVILIDGGKG QLAQAKAVFA 
ELDVPWDKHH PLLLGVAKGA DRKAGLETLF FEPEGEGFSL PPDSPALHVI QHIRDESHDH 
AIGGHRKKRA KVKNTSTLET IEGVGPKRRQ MLLKYMGGLQ GLRNASVEEI AKVPGISQGL 
AEKIFWSLKH