Gene SeHA_C2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2148 
Symbol 
ID6487739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2076269 
End bp2076907 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID642742344 
Producthypothetical protein 
Protein accessionYP_002045987 
Protein GI194450236 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.484462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value2.8697e-19 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATTG CACTGATGAT GGAAAATAGC CAGGCCAGCA AAAATGCCAT CATTTATAAC 
GAACTTAGCG CCGTCGCCAA TGAAAAGGGA TTTCCCGTTT TTAACGTCGG CATGTGCGAC
GAAAATGACC ATCACCTGAC GTACATTCAT TTAGGCATCA TGGCGAGTAT TCTGCTTAAT
GCAAACGCGG TTGATTTTGT GGTTACTGGC TGTGGCACTG GTCAGGGCGC GCTGATGTCG
TTAAATATTC ATCCAGGTGT CATTTGTGGC TATTGCATCG ATCCGGCAGA TGCTTTTCTG
TTTGCGCAGA TCAACAACGG CAATGCGTTG TCCCTGCCAT TTGCGAAAGG CTTTGGCTGG
GGCGCTGAGC TGAACGTGCG TTTCATCTTT GAAAAAGCGT TTACCGGGCG TAAAGGCGAG
GGGTATCCGC CTGAGCGCAA AGCGCCGCAG GTACGCAATG CGGGCATTTT GAACCAGGTT
AAGGCCGCGG TCGTCAAAGA GAATTATCTG GATACACTAC GGGCTATCGA TCCTGAACTG
GTTAAAACGG CGGTTTCAGG GCCGCGTTTC CAGCAATGTT TGTTTGAAAA CGGCCAGAAT
AAAGAAATAG AAGCGTTTGT ACGTGAGATG CTGGGGTAA
 
Protein sequence
MKIALMMENS QASKNAIIYN ELSAVANEKG FPVFNVGMCD ENDHHLTYIH LGIMASILLN 
ANAVDFVVTG CGTGQGALMS LNIHPGVICG YCIDPADAFL FAQINNGNAL SLPFAKGFGW
GAELNVRFIF EKAFTGRKGE GYPPERKAPQ VRNAGILNQV KAAVVKENYL DTLRAIDPEL
VKTAVSGPRF QQCLFENGQN KEIEAFVREM LG