Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2126 |
Symbol | |
ID | 6491512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2054784 |
End bp | 2055923 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642742322 |
Product | glycosyl hydrolase, family 88 |
Protein accession | YP_002045965 |
Protein GI | 194451436 |
COG category | [R] General function prediction only |
COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00000000763601 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATGGTTT ATCCAGTCAA ACACAGTCCG CTATTGCGTC AGCCTGAGCA TTTTATCGCC AGAGATGAAC TAAAAGCCCT GGTGCAAAAG GTGACGCATA ACCTGGTCAA TATTAAAGAT GAGACAGGCG AATTTTTATT GCGACTGGAC GACGGACGCG TGATCGATAC TAAAGGCTGG GCCGGATGGG AGTGGACGCA CGGCGTGGGC CTGTACGGAA TGTATCACTA TTACCAACAG ACCGGCGACC AGACGATGCG TAAGATCATT GATGACTGGT TTGCCGATCG TTTTGCGGAA GGCGCGACGA CGAAAAACGT TAATACGATG GCACCGTTTT TAACGCTGGC GTATCGCTAT GAAGAGACGC GTAATCCAGC GTATTTACCG TGGCTGGAAA CGTGGGCCGA ATGGGCGATG AATGAAATGC CCCGTACCGC TCACGGCGGA ATGCAGCACA TCACGCTGGC GGAGGAAAAT CATCAGCAGA TGTGGGACGA CACGCTAATG ATGACGGTGC TGCCGCTGGC GAAAATCGGT AAACTGTTGA ACCGGCCGGA ATATGTGGAA GAGGCAACCT ATCAGTTCCT GCTGCACGTG CAGAATTTGA TGGATAAAGA GACGGGGCTG TGGTTCCACG GCTGGAGCTA TGACGGTCAT CATAACTTCG CTAACGCTCG CTGGGCGCGC GGCAACAGCT GGCTGACCAT TGTGATCCCG GATTTTCTTG AACTGCTGGA CTTGCCAGAA AATAATGCCG TGCGCCGTTA TCTGGTCCAG GTACTGAATG CGCAGATCGC CGCGCTGGCG AAATGTCAGG ATGAAAGCGG TTTGTGGCAT ACGCTGCTTG ACGATCCGCA CTCTTATCTT GAGGCGTCGG CGACGGCGGG TTTTGCCTAC GGTATTCTTA AAGCGGTGCG CAAACGCTAT GTCGAACGGC ACTATGCGCA GGTGGCGGAA AAAGCTATTC GGGGGATAGT GAAACATATC TCGCCGGAAG GTGAACTGCT GCAAACGTCA TTTGGCACTG GCATGGGCCA CGATCTCGAT TTTTACCGTC ATATTCCGTT GACCTCTATG CCTTACGGGC AGGCGATGGC AATGCTGTGT TTGACGGAAT ATCTGCGTAA CTATTTCTGA
|
Protein sequence | MMVYPVKHSP LLRQPEHFIA RDELKALVQK VTHNLVNIKD ETGEFLLRLD DGRVIDTKGW AGWEWTHGVG LYGMYHYYQQ TGDQTMRKII DDWFADRFAE GATTKNVNTM APFLTLAYRY EETRNPAYLP WLETWAEWAM NEMPRTAHGG MQHITLAEEN HQQMWDDTLM MTVLPLAKIG KLLNRPEYVE EATYQFLLHV QNLMDKETGL WFHGWSYDGH HNFANARWAR GNSWLTIVIP DFLELLDLPE NNAVRRYLVQ VLNAQIAALA KCQDESGLWH TLLDDPHSYL EASATAGFAY GILKAVRKRY VERHYAQVAE KAIRGIVKHI SPEGELLQTS FGTGMGHDLD FYRHIPLTSM PYGQAMAMLC LTEYLRNYF
|
| |