Gene SeHA_C2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2126 
Symbol 
ID6491512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2054784 
End bp2055923 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content52% 
IMG OID642742322 
Productglycosyl hydrolase, family 88 
Protein accessionYP_002045965 
Protein GI194451436 
COG category[R] General function prediction only 
COG ID[COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00000000763601 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGGTTT ATCCAGTCAA ACACAGTCCG CTATTGCGTC AGCCTGAGCA TTTTATCGCC 
AGAGATGAAC TAAAAGCCCT GGTGCAAAAG GTGACGCATA ACCTGGTCAA TATTAAAGAT
GAGACAGGCG AATTTTTATT GCGACTGGAC GACGGACGCG TGATCGATAC TAAAGGCTGG
GCCGGATGGG AGTGGACGCA CGGCGTGGGC CTGTACGGAA TGTATCACTA TTACCAACAG
ACCGGCGACC AGACGATGCG TAAGATCATT GATGACTGGT TTGCCGATCG TTTTGCGGAA
GGCGCGACGA CGAAAAACGT TAATACGATG GCACCGTTTT TAACGCTGGC GTATCGCTAT
GAAGAGACGC GTAATCCAGC GTATTTACCG TGGCTGGAAA CGTGGGCCGA ATGGGCGATG
AATGAAATGC CCCGTACCGC TCACGGCGGA ATGCAGCACA TCACGCTGGC GGAGGAAAAT
CATCAGCAGA TGTGGGACGA CACGCTAATG ATGACGGTGC TGCCGCTGGC GAAAATCGGT
AAACTGTTGA ACCGGCCGGA ATATGTGGAA GAGGCAACCT ATCAGTTCCT GCTGCACGTG
CAGAATTTGA TGGATAAAGA GACGGGGCTG TGGTTCCACG GCTGGAGCTA TGACGGTCAT
CATAACTTCG CTAACGCTCG CTGGGCGCGC GGCAACAGCT GGCTGACCAT TGTGATCCCG
GATTTTCTTG AACTGCTGGA CTTGCCAGAA AATAATGCCG TGCGCCGTTA TCTGGTCCAG
GTACTGAATG CGCAGATCGC CGCGCTGGCG AAATGTCAGG ATGAAAGCGG TTTGTGGCAT
ACGCTGCTTG ACGATCCGCA CTCTTATCTT GAGGCGTCGG CGACGGCGGG TTTTGCCTAC
GGTATTCTTA AAGCGGTGCG CAAACGCTAT GTCGAACGGC ACTATGCGCA GGTGGCGGAA
AAAGCTATTC GGGGGATAGT GAAACATATC TCGCCGGAAG GTGAACTGCT GCAAACGTCA
TTTGGCACTG GCATGGGCCA CGATCTCGAT TTTTACCGTC ATATTCCGTT GACCTCTATG
CCTTACGGGC AGGCGATGGC AATGCTGTGT TTGACGGAAT ATCTGCGTAA CTATTTCTGA
 
Protein sequence
MMVYPVKHSP LLRQPEHFIA RDELKALVQK VTHNLVNIKD ETGEFLLRLD DGRVIDTKGW 
AGWEWTHGVG LYGMYHYYQQ TGDQTMRKII DDWFADRFAE GATTKNVNTM APFLTLAYRY
EETRNPAYLP WLETWAEWAM NEMPRTAHGG MQHITLAEEN HQQMWDDTLM MTVLPLAKIG
KLLNRPEYVE EATYQFLLHV QNLMDKETGL WFHGWSYDGH HNFANARWAR GNSWLTIVIP
DFLELLDLPE NNAVRRYLVQ VLNAQIAALA KCQDESGLWH TLLDDPHSYL EASATAGFAY
GILKAVRKRY VERHYAQVAE KAIRGIVKHI SPEGELLQTS FGTGMGHDLD FYRHIPLTSM
PYGQAMAMLC LTEYLRNYF