Gene SeHA_C2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2108 
SymbolruvB 
ID6489528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2038075 
End bp2039085 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content58% 
IMG OID642742304 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_002045947 
Protein GI194451535 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.252002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.279118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAG CAGATCGCCT GATTTCAGCA GGCGCCACGA TCGCAGAAGA CGTCGCCGAT 
CGCGCCATTC GCCCGAAGTT ATTGGCGGAA TATGTCGGCC AACCGCAGGT GCGCTCCCAG
ATGGAGATCT TTATTCAGGC GGCAAAACTG CGTGGCGACG CACTAGATCA CTTGCTGATT
TTCGGCCCGC CAGGGTTAGG TAAGACGACT CTGGCGAATA TCGTTGCCAA TGAAATGGGC
GTCAATCTCC GAACCACGTC CGGCCCGGTG CTGGAAAAAG CAGGCGATCT GGCGGCTATG
CTCACCAATC TTGAACCGCA TGATGTGCTG TTTATTGATG AGATTCACCG GCTTTCACCG
GTGGTGGAAG AGGTACTCTA TCCGGCGATG GAAGATTACC AGTTGGATAT TATGATTGGC
GAAGGGCCTG CCGCACGTTC AATTAAGATC GATCTGCCGC CGTTTACGCT CATTGGCGCG
ACGACGCGCG CCGGGTCGTT AACGTCCCCG CTACGTGACC GTTTTGGTAT TGTGCAGCGC
CTGGAGTTCT ACCAGGTGCC CGATCTGCAG CACATCGTCG GGCGCAGCGC AAGGCACATG
GGGCTTGAGA TGAGCGATGA CGGCGCGCTG GAAGTGGCGC GTCGGGCGCG CGGTACGCCG
CGTATAGCCA ACCGCCTGCT CAGACGTGTG CGTGATTTCG CCGAGGTGAA GCATGACGGG
GCTATTTCAG CGGAAATTGC CGCGCAGGCG CTGGATATGC TGAACGTCGA TGCGGAAGGG
TTTGACTATA TGGATCGCAA GCTGCTGCTG GCGGTTATTG ATAAATTCTT CGGTGGACCG
GTCGGCCTGG ATAACCTGGC GGCGGCGATT GGCGAAGAGC GTGAAACCAT TGAGGATGTG
CTGGAGCCGT ATCTGATTCA GCAAGGCTTT TTGCAGCGCA CGCCGCGTGG GCGTATGGCA
ACGGTGCGCG CCTGGAACCA TTTCGGGATC ACGCCGCCAG AGATGCCTTA G
 
Protein sequence
MIEADRLISA GATIAEDVAD RAIRPKLLAE YVGQPQVRSQ MEIFIQAAKL RGDALDHLLI 
FGPPGLGKTT LANIVANEMG VNLRTTSGPV LEKAGDLAAM LTNLEPHDVL FIDEIHRLSP
VVEEVLYPAM EDYQLDIMIG EGPAARSIKI DLPPFTLIGA TTRAGSLTSP LRDRFGIVQR
LEFYQVPDLQ HIVGRSARHM GLEMSDDGAL EVARRARGTP RIANRLLRRV RDFAEVKHDG
AISAEIAAQA LDMLNVDAEG FDYMDRKLLL AVIDKFFGGP VGLDNLAAAI GEERETIEDV
LEPYLIQQGF LQRTPRGRMA TVRAWNHFGI TPPEMP