Gene SeHA_C2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2084 
Symbol 
ID6490724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp2016089 
End bp2016943 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content48% 
IMG OID642742282 
Productintegrase 
Protein accessionYP_002045925 
Protein GI194448390 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.266989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCAT GGATTGATCG CTATGAGGTT TTATTACAGC GCCGGAATCT GTCGGTTAAT 
ACCTACAAGA TTCGCAGTAA TCAATTAGCG ACCGTACGCG AAAAAATGGG AGAAATAATA 
CTGGCAGAAG TAACAACCCG GCACATTGCC AAGTTTCTTG AGTCGTGGAT AACCGAGGGA 
AAAAACACTA TGGCGGGAGC AATGAGATCA GTTCTATCTG ACATGTTCAG AGAGGCTATT 
GTCGAAGGGC ATATTGTGAA AAACCCGGTG GAAGCAACCC GGATACCAGA GATTAAGGTG 
GCCAGGGAAC GCCTGCAACT GGAAACGTAT AACGCCACAC GAGCGGCAGC AGAGCATATG 
CCTGCATGGT TCCCTCTCGC GATGGATTTA GCGCTCGTTA CTGGTCAACG TAGGGAGGAT 
ATCGTAAATA TGAAATTTAG TGATGTTTTT GACAACCGCT TATACGTCAC TCAGATTAAA 
ACCGGAATGA AAATAGCCAT TCCCCTCTCC CTGACACTTC GGGCGACGGG GTTACGTCTG 
GGAACGGTAA TCGATCGCTG CCGACTTGTA AGCCGCACTG ATTTCATGAT CAGTGCCGGA 
ATCAGGAAAA ATAGCCCGAC CGGGAATATT CATCCGGATG GATTGACAAA GACATTTGTA 
AAAGCAAGAA AAGCCTCCGG TGTTAACTTC AGCAATAATC CACCGACATT TCACGAGATC 
CGAAGTCTGG CCGGGCGGCT GTACAAAAAC GAGCACGGCG AGGTGTTCGC CCAAAAACTC 
CTGGGCCACA CATCAGAGAA CACCACGAAA CTCTATCTCG ATGAACGCGA TAATAAAGCT 
TACGTGATGC TCTGA
 
Protein sequence
MSAWIDRYEV LLQRRNLSVN TYKIRSNQLA TVREKMGEII LAEVTTRHIA KFLESWITEG 
KNTMAGAMRS VLSDMFREAI VEGHIVKNPV EATRIPEIKV ARERLQLETY NATRAAAEHM 
PAWFPLAMDL ALVTGQRRED IVNMKFSDVF DNRLYVTQIK TGMKIAIPLS LTLRATGLRL 
GTVIDRCRLV SRTDFMISAG IRKNSPTGNI HPDGLTKTFV KARKASGVNF SNNPPTFHEI 
RSLAGRLYKN EHGEVFAQKL LGHTSENTTK LYLDERDNKA YVML