Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2051 |
Symbol | yebU |
ID | 6488616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1996281 |
End bp | 1997822 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642742252 |
Product | rRNA (cytosine-C(5)-)-methyltransferase RsmF |
Protein accession | YP_002045895 |
Protein GI | 194449925 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.390449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCACC GCTCTGCCAC GTTAAACACC AGGCTCCGGC GTACTCGCGC CGGAGCGTTT TATGCTACAC TGCGCGCCTG TTTTTTTGCC GGCGATACAC CTGTGGCTCA ACACGCTGTC TATTTTCCTG ACGCTTTTCT GACGCAAATG CGTGAAGCAA TGCCTTCCAC GCTCTCTTTT GATGAATTTA TTTCGGCCTG CCAACGCCCG TTGCGCCGCA GTATACGCAT CAATACGCTT AAAATATCCG TGGCTGATTT CCTTGCCCTA ATCGCGCCCT ACGGCTGGTC GCTCACGCCA ATTCCGTGGT GTCATGAAGG GTTCTGGATC GAACGCGATG ATGAAGAGGC ATTGCCGCTT GGCAGTACCG CTGAGCATTT AAGCGGCCTG TTTTACATTC AGGAGGCCAG TTCGATGCTG CCGGTCGCGG CCCTGTTCGC CGATGATAAT CATCCGCAGC GGGTCATGGA TATGGCAGCG GCGCCTGGCT CCAAAACCAC GCAGATCGCT GCCCGCATGG GGAACCGCGG CGCCATTCTG GCCAACGAAT TTTCGGCCAG CCGCGTCAAA GTTCTGCACG CTAATATCAG CCGATGTGGA ATCGCCAATA CCGCACTGAC GCATTTCGAT GGCCGCGTAT TTGGCGCTGC GTTACCGGAG ATGTTTGACG CTATCCTGCT GGATGCGCCC TGCTCTGGCG AAGGCGTAGT ACGTAAAGAT CCTGATGCGC TAAAAAACTG GTCGCCAGAA AGCAATCTGG ATATCGCGGC GACACAGCGG GAACTGCTCA ACAGCGCTTT TCATGCTTTA CGACCCGGCG GCACGCTGGT CTACTCCACC TGCACGTTAA ATCGCCAGGA AAACGAAGAG GTCTGCCTCT GGCTGAAAGA GACCTACGCC GACGCCGTTG AATTTTTGCC GCTGGGTGAT CTGTTTCCTG ACGCTGACCG TGCCCTCACC CCGGAAGGCT TCCTGCACGT CTTCCCGCAA ATTTACGACT GCGAAGGATT CTTCGTCGCA CGTCTGCGTA AAATGTCATC CCTTCCAGCC ATGCCCGCGC CGGGGTATAA AGTGGGGGCG TTTCCTTTTA CCCCCCTCAA AGGCCGCGAA GCATTACACG TTACCCAGGC GGCCAACGCC GTCGGACTGT TATGGGATGA AAATCTCCAT CTTTGGCAGC GTGAAAAAGA GGTCTGGCTG TTCCCGGCAG AAATTGAATC ACTGATCGGA AAAGTCCGTT TTTCCCGGCT CGGCATTAAG CTGGCCGAAA GTCATAATAA AGGCTATCGC TGGCAACATG AGGCGACGAT AGCCCTTGCC TGCCCGACTC ATGCTCACGC GTTCGAACTT TCTGTGCAAG AGGCGGAGGA GTGGTATCGC GGTCGGGATA TTTATCCGCA AACACCCCCT GCCGCTGATG ATGTCCTGGT GACGTTCCAG CATCAGCCAC TTGGTCTGGC AAAACGTATC GGCGCCAGAA TAAAGAACAG TTACCCGCGT GAACTGGTAC GTGATGGCAA ACTCTTTACT GGTAATAGTT AA
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Protein sequence | MGHRSATLNT RLRRTRAGAF YATLRACFFA GDTPVAQHAV YFPDAFLTQM REAMPSTLSF DEFISACQRP LRRSIRINTL KISVADFLAL IAPYGWSLTP IPWCHEGFWI ERDDEEALPL GSTAEHLSGL FYIQEASSML PVAALFADDN HPQRVMDMAA APGSKTTQIA ARMGNRGAIL ANEFSASRVK VLHANISRCG IANTALTHFD GRVFGAALPE MFDAILLDAP CSGEGVVRKD PDALKNWSPE SNLDIAATQR ELLNSAFHAL RPGGTLVYST CTLNRQENEE VCLWLKETYA DAVEFLPLGD LFPDADRALT PEGFLHVFPQ IYDCEGFFVA RLRKMSSLPA MPAPGYKVGA FPFTPLKGRE ALHVTQAANA VGLLWDENLH LWQREKEVWL FPAEIESLIG KVRFSRLGIK LAESHNKGYR WQHEATIALA CPTHAHAFEL SVQEAEEWYR GRDIYPQTPP AADDVLVTFQ HQPLGLAKRI GARIKNSYPR ELVRDGKLFT GNS
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