Gene SeHA_C2051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2051 
SymbolyebU 
ID6488616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1996281 
End bp1997822 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content55% 
IMG OID642742252 
ProductrRNA (cytosine-C(5)-)-methyltransferase RsmF 
Protein accessionYP_002045895 
Protein GI194449925 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00446] NOL1/NOP2/sun family putative RNA methylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.390449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCACC GCTCTGCCAC GTTAAACACC AGGCTCCGGC GTACTCGCGC CGGAGCGTTT 
TATGCTACAC TGCGCGCCTG TTTTTTTGCC GGCGATACAC CTGTGGCTCA ACACGCTGTC
TATTTTCCTG ACGCTTTTCT GACGCAAATG CGTGAAGCAA TGCCTTCCAC GCTCTCTTTT
GATGAATTTA TTTCGGCCTG CCAACGCCCG TTGCGCCGCA GTATACGCAT CAATACGCTT
AAAATATCCG TGGCTGATTT CCTTGCCCTA ATCGCGCCCT ACGGCTGGTC GCTCACGCCA
ATTCCGTGGT GTCATGAAGG GTTCTGGATC GAACGCGATG ATGAAGAGGC ATTGCCGCTT
GGCAGTACCG CTGAGCATTT AAGCGGCCTG TTTTACATTC AGGAGGCCAG TTCGATGCTG
CCGGTCGCGG CCCTGTTCGC CGATGATAAT CATCCGCAGC GGGTCATGGA TATGGCAGCG
GCGCCTGGCT CCAAAACCAC GCAGATCGCT GCCCGCATGG GGAACCGCGG CGCCATTCTG
GCCAACGAAT TTTCGGCCAG CCGCGTCAAA GTTCTGCACG CTAATATCAG CCGATGTGGA
ATCGCCAATA CCGCACTGAC GCATTTCGAT GGCCGCGTAT TTGGCGCTGC GTTACCGGAG
ATGTTTGACG CTATCCTGCT GGATGCGCCC TGCTCTGGCG AAGGCGTAGT ACGTAAAGAT
CCTGATGCGC TAAAAAACTG GTCGCCAGAA AGCAATCTGG ATATCGCGGC GACACAGCGG
GAACTGCTCA ACAGCGCTTT TCATGCTTTA CGACCCGGCG GCACGCTGGT CTACTCCACC
TGCACGTTAA ATCGCCAGGA AAACGAAGAG GTCTGCCTCT GGCTGAAAGA GACCTACGCC
GACGCCGTTG AATTTTTGCC GCTGGGTGAT CTGTTTCCTG ACGCTGACCG TGCCCTCACC
CCGGAAGGCT TCCTGCACGT CTTCCCGCAA ATTTACGACT GCGAAGGATT CTTCGTCGCA
CGTCTGCGTA AAATGTCATC CCTTCCAGCC ATGCCCGCGC CGGGGTATAA AGTGGGGGCG
TTTCCTTTTA CCCCCCTCAA AGGCCGCGAA GCATTACACG TTACCCAGGC GGCCAACGCC
GTCGGACTGT TATGGGATGA AAATCTCCAT CTTTGGCAGC GTGAAAAAGA GGTCTGGCTG
TTCCCGGCAG AAATTGAATC ACTGATCGGA AAAGTCCGTT TTTCCCGGCT CGGCATTAAG
CTGGCCGAAA GTCATAATAA AGGCTATCGC TGGCAACATG AGGCGACGAT AGCCCTTGCC
TGCCCGACTC ATGCTCACGC GTTCGAACTT TCTGTGCAAG AGGCGGAGGA GTGGTATCGC
GGTCGGGATA TTTATCCGCA AACACCCCCT GCCGCTGATG ATGTCCTGGT GACGTTCCAG
CATCAGCCAC TTGGTCTGGC AAAACGTATC GGCGCCAGAA TAAAGAACAG TTACCCGCGT
GAACTGGTAC GTGATGGCAA ACTCTTTACT GGTAATAGTT AA
 
Protein sequence
MGHRSATLNT RLRRTRAGAF YATLRACFFA GDTPVAQHAV YFPDAFLTQM REAMPSTLSF 
DEFISACQRP LRRSIRINTL KISVADFLAL IAPYGWSLTP IPWCHEGFWI ERDDEEALPL
GSTAEHLSGL FYIQEASSML PVAALFADDN HPQRVMDMAA APGSKTTQIA ARMGNRGAIL
ANEFSASRVK VLHANISRCG IANTALTHFD GRVFGAALPE MFDAILLDAP CSGEGVVRKD
PDALKNWSPE SNLDIAATQR ELLNSAFHAL RPGGTLVYST CTLNRQENEE VCLWLKETYA
DAVEFLPLGD LFPDADRALT PEGFLHVFPQ IYDCEGFFVA RLRKMSSLPA MPAPGYKVGA
FPFTPLKGRE ALHVTQAANA VGLLWDENLH LWQREKEVWL FPAEIESLIG KVRFSRLGIK
LAESHNKGYR WQHEATIALA CPTHAHAFEL SVQEAEEWYR GRDIYPQTPP AADDVLVTFQ
HQPLGLAKRI GARIKNSYPR ELVRDGKLFT GNS