| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2032 |
|---|
| Symbol | manZ |
|---|
| ID | 6488687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 1978175 |
|---|
| End bp | 1979026 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642742235 |
|---|
| Product | PTS system mannose-specific transporter subunit IID |
|---|
| Protein accession | YP_002045878 |
|---|
| Protein GI | 194450594 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
|---|
| TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.394524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGATA TGACTAAAAC TACCACCGAG AAAAAACTCA CTCCGAGCGA TATTCGCGGC
GTATTTCTTC GTTCTAACCT GTTCCAGGGG TCATGGAACT TCGAACGTAT GCAAGCGCTG
GGCTTCTGCT TCTCTATGGT GCCGGCGATT CGTCGCCTGT ATCCGGAGAA TAATGACGCG
CGTAAACAGG CGATTAAACG TCACCTGGAG TTCTTTAACA CTCATCCTTA CGTTGCGGCG
CCGGTACTGG GCGTGACCCT GGCAATGGAA GAAAAGCGTG CGAACGGTGC AGAGATTGAC
GATGGCGCTA TCAACGGTAT CAAAGTCGGT CTGATGGGAC CGCTGGCAGG CGTCGGCGAC
CCTATCTTCT GGGGTACCGT CCGTCCCGTA TTCGCGGCGC TGGGCGCAGG TATTGCAATG
AGCGGCAGCC TGCTTGGTCC GCTGCTGTTT TTCATCCTGT TTAACCTGGT GCGTCTGGCG
ACCCGTTATT ATGGCGTGGC TTATGGCTAC CGCAAAGGCG TCGATATCGT TAAAGATATG
GGCGGCGGCT TCCTGCAAAA ACTGACTGAG GGGGCGTCAA TCCTCGGCCT GTTTGTCATG
GGGGCATTGG TTAACAAGTG GACGCATGTG AATATCCCGC TGGTGGTTTC CACCATCACC
GGTCAGGATG GTCAGACACG CGTTACCACC GTGCAAACCA TTCTCGACCA GCTGATGCCG
GGTCTGGTTC CGCTACTGTT GACCTTTGCC TGTATGTGGC TGCTGCGTAA GAAAGTTAAC
CCGCTGTGGA TTATCGTGGG CTTCTTCGTC ATTGGTATCG CCGGCTACTC CGTAGGACTG
CTGGGCCAGT AA
|
|---|
| Protein sequence | MVDMTKTTTE KKLTPSDIRG VFLRSNLFQG SWNFERMQAL GFCFSMVPAI RRLYPENNDA
RKQAIKRHLE FFNTHPYVAA PVLGVTLAME EKRANGAEID DGAINGIKVG LMGPLAGVGD
PIFWGTVRPV FAALGAGIAM SGSLLGPLLF FILFNLVRLA TRYYGVAYGY RKGVDIVKDM
GGGFLQKLTE GASILGLFVM GALVNKWTHV NIPLVVSTIT GQDGQTRVTT VQTILDQLMP
GLVPLLLTFA CMWLLRKKVN PLWIIVGFFV IGIAGYSVGL LGQ
|
|---|
| |