Gene SeHA_C2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2030 
SymbolmanX 
ID6490528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1976341 
End bp1977309 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content53% 
IMG OID642742233 
ProductPTS system mannose-specific IIAB component 
Protein accessionYP_002045876 
Protein GI194448000 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0638718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATTG CTATTGTTAT AGGCACACAT GGTTGGGCTG CAGAGCAGTT ACTTAAAACA 
GCCGAAATGC TGTTAGGCGA GCAGGAAAAC GTCGGCTGGA TCGATTTCGT TCCAGGCGAA 
AATGCCGAAA CGCTGATCGA AAAGTACAAC GCTCAGTTGG CTAAACTCGA TACCAGTAAA 
GGCGTGCTAT TTCTCGTTGA TACATGGGGA GGCAGTCCGT TTAATGCTGC CAGCCGCATT 
GTCGTCGATA AAGAGCGCTA TGAAGTTATT GCCGGCGTCA ACATCCCGAT GCTGGTCGAA 
ACGTTTATGG CTCGTGACGA CGATCCGAGC TTTGACGAGC TGGTCGCACT GGCGGTAGAA 
ACCGGTCGTG AAGGCGTAAA AGCGCTGAAA GCGAAACCGG TAGAAAAAGC CGCGCCAGCG 
CCAGTCGCCG CCGCGCCAAA AGCGGCCGCA CCGGCAAAAC CGATGGGCCC GAATGATTAT 
ATGGTTATCG GGCTTGCCCG TATTGATGAC CGCCTCATTC ACGGTCAGGT CGCTACCCGC 
TGGACCAAAG AGACCAATGT CAGCCGTATT ATTGTTGTGA GCGATGAAGT GGCGGCGGAT 
ACCGTTCGTA AAACGCTGCT GACGCAAGTT GCGCCGCCGG GCGTTACGGC GCATGTGGTT 
GACGTCGCGA AGATGATTCG CGTCTACAAT AACCCGAAAT ACGCCGGCGA ACGCGTGATG 
CTTCTGTTTA CCAATCCTAC CGACGTCGAG CGCATCGTTG AGGGCGGCGT GAAAGTCACT 
TCCGTGAACA TTGGCGGTAT GGCCTATCGT CAAGGTAAAA CGCAGGTGAA CAACGCCGTT 
TCCGTCGATG AAAAGGATAT CGAAGCCTTT AAAAAGCTCA ACGAGCGCGG CATCGAGCTT 
GAGGTGCGTA AAGTTTCCAC CGATCCGAAA CTGAAAATGA TGGATTTAAT TGCCAAAGTG 
GCGAAATAA
 
Protein sequence
MTIAIVIGTH GWAAEQLLKT AEMLLGEQEN VGWIDFVPGE NAETLIEKYN AQLAKLDTSK 
GVLFLVDTWG GSPFNAASRI VVDKERYEVI AGVNIPMLVE TFMARDDDPS FDELVALAVE 
TGREGVKALK AKPVEKAAPA PVAAAPKAAA PAKPMGPNDY MVIGLARIDD RLIHGQVATR 
WTKETNVSRI IVVSDEVAAD TVRKTLLTQV APPGVTAHVV DVAKMIRVYN NPKYAGERVM 
LLFTNPTDVE RIVEGGVKVT SVNIGGMAYR QGKTQVNNAV SVDEKDIEAF KKLNERGIEL 
EVRKVSTDPK LKMMDLIAKV AK