| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2003 |
|---|
| Symbol | fadR |
|---|
| ID | 6491337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 1953694 |
|---|
| End bp | 1954413 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642742207 |
|---|
| Product | fatty acid metabolism regulator |
|---|
| Protein accession | YP_002045850 |
|---|
| Protein GI | 194448554 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.69959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATTA AGGCGCAGAG CCCGGCGGGT TTCGCGGAAG AGTATATTAT TGAAAGTATC
TGGAATAACC GCTTTCCTCC TGGCACGATC TTACCGGCAG AACGAGAACT CTCCGAACTG
ATCGGCGTGA CGCGCACGAC ATTACGCGAG GTGTTACAGC GGCTGGCGCG AGATGGCTGG
CTGACCATTC AGCATGGCAA ACCGACAAAG GTTAATAATT TTTGGGAAAC GTCAGGGCTG
AATATCCTTG AAACGCTGGC CCGCCTTGAT CATGAAAGCG TTCCGCAACT GATCGACAAT
TTGTTGTCGG TGCGTACCAA TATTTCTACT ATCTTTATTC GTACCGCGTT GCGTCAACAC
CCGGATAAGG CGCAGGAAGT ACTGGCCACT GCCCACGAAG TGGCCGACCA TGCCGATGCA
TTCGCCGATC TGGACTATAA CATCTTTCGT GGTCTGGCAT TCGCCTCCGG CAATCCTATT
TACGGCTTGA TCCTGAACGG CATGAAAGGG TTATACACCC GCATTGGTCG CCACTATTTC
GCCAATCCGG AAGCGCGCAG TCTGGCACTG GGTTTCTATC ATAAATTATC GTCGTTATGC
GAGCAGGGCG CGCACGACCA GGTGTATGAA ACGGTGCGAC GTTACGGGCA TGACAGCGGC
GAGATTTGGC ATCGGATGCA GAAAAATCTG CCCGGCGATT TAGCGATTCA GGGACGATAA
|
|---|
| Protein sequence | MVIKAQSPAG FAEEYIIESI WNNRFPPGTI LPAERELSEL IGVTRTTLRE VLQRLARDGW
LTIQHGKPTK VNNFWETSGL NILETLARLD HESVPQLIDN LLSVRTNIST IFIRTALRQH
PDKAQEVLAT AHEVADHADA FADLDYNIFR GLAFASGNPI YGLILNGMKG LYTRIGRHYF
ANPEARSLAL GFYHKLSSLC EQGAHDQVYE TVRRYGHDSG EIWHRMQKNL PGDLAIQGR
|
|---|
| |