| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C1978 |
|---|
| Symbol | ychM |
|---|
| ID | 6490601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 1926641 |
|---|
| End bp | 1928326 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642742183 |
|---|
| Product | putative sulfate transporter YchM |
|---|
| Protein accession | YP_002045826 |
|---|
| Protein GI | 194447996 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0846232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAAAT TATTTTCCTC ACATGTGATG CCTTTCCGCG CTCTCATCGA TGCTTGCTGG
AAAGAAAAAT ATACCGCCTC CCGGTTCACC CGTGATGTGA TAGCCGGGAT CACCGTCGGG
ATTATTGCTA TCCCGCTGGC GATGGCGCTG GCAATTGGCA GTGGCGTTGC GCCGCAGTAT
GGCCTCTATA CCTCCGCTGT CGCCGGGATC GTGATCGCGC TAACCGGCGG CTCGCGCTTT
AGCGTTTCCG GCCCTACCGC CGCGTTTGTG GTGATTTTGT ATCCGGTATC GCAACAGTTT
GGTCTGGCGG GCCTACTGGT CGCCACGCTG ATGTCGGGCT TCTTCCTGAT CCTTTTCGGC
CTGGCGAGAC TGGGGCGATT GATTGAATAT ATCCCGGTGT CGGTCACGTT GGGTTTTACC
TCAGGGATTG GTATTACCAT CGGTACCATG CAGATTAAAG ATTTTCTTGG TCTGCAGATG
GCCCATGTGC CAGAGCACTA TTTGCAGAAA GTCGGCGCGC TGTTTATGGC GTTGCCCACC
GTCAATATTG GCGATGCCGC CATTGGCGTG GTAACGCTGG GAACGTTGAT TTTCTGGCCG
CGTCTCGGTA TTCGTCTGCC AGGACATCTT CCCGCGCTGC TGGCCGGTTG CGCCGTGATG
GGGATCGTTA ATCTGCTGGG CGGCAATGTG GCGACTATCG GCTCACAGTT CCATTACGTT
CTGGCTGACG GCACTCAGGG CAACGGCATC CCGCAGCTCC TGCCGCAACT GATGCTGCCG
TGGAGTCTTC CTGGCTCCGA TTTCACGCTA AGCTGGGATT CACTGCGCGC GCTGCTGCCA
GCGGCCTTCT CGATGGCAAT GCTGGGGGCA ATCGAATCAT TGCTCTGCGC TGTCGTGCTG
GACGGCATGA CCGGCACCAA ACATAAAGCT AACAGCGAAC TTATCGGCCA GGGGCTGGGG
AATATGGTCG CGCCGTTCTT TGGCGGCATC ACCGCCACCG CCGCGATTGC CCGCTCTGCC
GCCAACGTCC GCGCTGGCGC GACCTCTCCC GTCTCAGCGG TAATTCACGC TATCCTGGTT
ATTCTGGCGC TACTGGTCTT AGCCCCGCTA CTCTCCTGGC TACCACTTTC CGCGATGGCG
GCGCTACTGC TGATGGTGGC ATGGAATATG AGTGAAGCCC ATAAAGTGGT GGATCTGTTA
CGCCATGCGC CGAAAGACGA CATCATCGTT ATGCTGCTGT GCATGTCATT AACGGTTCTG
TTTGATATGG TCATCGCCAT CAGCGTGGGG ATTGTCCTTG CTTCCCTGCT GTTTATGCGC
CGTATTGCGC GAATGACTCG ACTTGCGCCG GTCAATGTCG ATGTGCCTGA TGATGTGCTG
GTGCTGCGTG TTATCGGTCC GCTCTTTTTC GCCGCGGCGG AAGGGCTGTT TACTGACCTT
GAGTCACGTA TTAAGGGCAA ACGTATCGTC GTTCTGAAAT GGGACGCAGT ACCAGTGCTG
GATGCAGGCG GGCTTGATGC TTTTCAGCGT TTTGTGAAGC GTCTGCCGGA AGGTTGCGAA
TTGCGTATCA GTAACCTGGA GTTCCAACCG CTGCGCACAA TGGCGCGTGC CGGTATCAAA
CCTATTCCTG GGCGTCTGAC CTTCTTCCCG AACAGGACGG AGGCGTTAGC AGATTTACTC
AGTTAA
|
|---|
| Protein sequence | MNKLFSSHVM PFRALIDACW KEKYTASRFT RDVIAGITVG IIAIPLAMAL AIGSGVAPQY
GLYTSAVAGI VIALTGGSRF SVSGPTAAFV VILYPVSQQF GLAGLLVATL MSGFFLILFG
LARLGRLIEY IPVSVTLGFT SGIGITIGTM QIKDFLGLQM AHVPEHYLQK VGALFMALPT
VNIGDAAIGV VTLGTLIFWP RLGIRLPGHL PALLAGCAVM GIVNLLGGNV ATIGSQFHYV
LADGTQGNGI PQLLPQLMLP WSLPGSDFTL SWDSLRALLP AAFSMAMLGA IESLLCAVVL
DGMTGTKHKA NSELIGQGLG NMVAPFFGGI TATAAIARSA ANVRAGATSP VSAVIHAILV
ILALLVLAPL LSWLPLSAMA ALLLMVAWNM SEAHKVVDLL RHAPKDDIIV MLLCMSLTVL
FDMVIAISVG IVLASLLFMR RIARMTRLAP VNVDVPDDVL VLRVIGPLFF AAAEGLFTDL
ESRIKGKRIV VLKWDAVPVL DAGGLDAFQR FVKRLPEGCE LRISNLEFQP LRTMARAGIK
PIPGRLTFFP NRTEALADLL S
|
|---|
| |