Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1975 |
Symbol | ipk |
ID | 6489802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1924455 |
End bp | 1925303 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642742180 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_002045823 |
Protein GI | 194449822 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.383787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATT GGCCTTCTCC GGCAAAATTA AATCTGTTTT TATATATCAC CGGACAGCGA GCAGACGGCT ACCACACGCT GCAGACGCTG TTTCAGTTTC TGGATTATGG CGACACACTC CACATCGAAC CGCGTCGCGA TGGCGAAATC CATTTATTAA CGCCGGTTAA CGGCGTTGAA AATGAAGACA ATCTGATCGT CCGCGCCGCG CGGCTGTTGA TGAAAATCGC CTCGGAGAGT GGACGCCTGC CCGCCGGAAG CGGCGCGGAT ATCAGCATTG AGAAGCGCCT TCCCATGGGC GGCGGTCTGG GCGGCGGCTC GTCTAACGCC GCGACCGTTC TGGTGGCGCT CAATCATCTT TGGCAATGCG GGCTTTCCAT TGATGAACTG GCAACGCTCG GCCTGACGCT CGGCGCCGAC GTCCCGGTCT TTGTTCGTGG CCACGCCGCG TTTGCCGAAG GCGTAGGCGA AATATTAACG CCGGTGAATC CGCCGGAAAA ATGGTATCTG GTCGCGCACC CTGGCGTAAG TATTCCGACG CCGGTTATCT TTAAAGATCC TCAATTGCCG CGTAATACGC CAAAAAGGTC AATAGATACG TTACTAAAAT GTGAATTCAG CAATGATTGC GAGGTTATCG CAAGAAAACG TTTTCGCGAG GTTGATGCGG CGCTTTCCTG GCTGTTAGAA TACGCGCCGT CGCGCCTGAC TGGGACAGGG GCCTGTGTCT TTGCTGAATT CGATACAGAG TCTTGTGCTC GCCAGGTGCT TGAGCAAGCC CCGGAATGGC TCAATGCTTT TGTGGCGAAG GGTGTCAACC TCTCCCCATT GCATCGAGAG TTACTCTAA
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Protein sequence | MTHWPSPAKL NLFLYITGQR ADGYHTLQTL FQFLDYGDTL HIEPRRDGEI HLLTPVNGVE NEDNLIVRAA RLLMKIASES GRLPAGSGAD ISIEKRLPMG GGLGGGSSNA ATVLVALNHL WQCGLSIDEL ATLGLTLGAD VPVFVRGHAA FAEGVGEILT PVNPPEKWYL VAHPGVSIPT PVIFKDPQLP RNTPKRSIDT LLKCEFSNDC EVIARKRFRE VDAALSWLLE YAPSRLTGTG ACVFAEFDTE SCARQVLEQA PEWLNAFVAK GVNLSPLHRE LL
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