Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1968 |
Symbol | sirB1 |
ID | 6491186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 1919107 |
End bp | 1919916 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642742173 |
Product | putative transcriptional regulator |
Protein accession | YP_002045816 |
Protein GI | 194449271 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.213248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTCGT TAGCTGATTT CGAATTTAAC AATGCGCCGC TGTGTGATGG CATGATCCTG GCATCAGAGA TGATTCGCCT GGATTTTCCC ACGCAGTTTG TCTACGACGA ACTGGAACGT CTGGTCAGTC TGGCGCAGGA AGAAATTAGC CAGCTCCTGT CTCAGGATGA GCAACTGGAA AAATTGCTGG CACTTTTTTA CGGCGAGTGG GGGTTCACGG ATTCCCGCGG CGTCTACCGT CTTTCTGATG CTTTATGGCT CGATAAAGTC CTGAAAAAAC GCCAGGGGAG CGCGGTATCG TTGGGCGCTA TTTTATTATG GATAGCAAAC CGTCTTGATT TGCCGTTGGT GCCCGTTATC TTCCCAACGC AGTTGATTTT GCGTATTGAA TCGCTGGAAG GGGAAATGTG GCTGATTAAC CCGTTCAACG GTGAAACGCT TGATGAACAT ACTCTGGAAG TCTGGTTAAA AGGCAATATT AGTCCGGTCG CCGAGTTGTT TAATGAAGAT TTGGACGAAG CGGATAACGC CGAAGTGATT CGTAAGCTAC TGGATACGCT GAAATCCTCG CTGATGGAGG AACGGCAAAT GGAGCTGGCG CTGCGCGTTA GCGAAGCATT GTTGCAATTT AACCCGGAAG ATCCTTACGA AATCCGTGAC CGCGGGTTGA TCTACGCGCA GCTTGAGTGT GAACACGTTG CGCTGACTGA TTTAAGCTAC TTCGTTGAAC AGTGTCCGGA AGACCCGATC AGCGAAATGA TTCGTGCGCA GATCAACACC ATTGCGCACA AGCAAATTGT TCTACATTAA
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Protein sequence | MRSLADFEFN NAPLCDGMIL ASEMIRLDFP TQFVYDELER LVSLAQEEIS QLLSQDEQLE KLLALFYGEW GFTDSRGVYR LSDALWLDKV LKKRQGSAVS LGAILLWIAN RLDLPLVPVI FPTQLILRIE SLEGEMWLIN PFNGETLDEH TLEVWLKGNI SPVAELFNED LDEADNAEVI RKLLDTLKSS LMEERQMELA LRVSEALLQF NPEDPYEIRD RGLIYAQLEC EHVALTDLSY FVEQCPEDPI SEMIRAQINT IAHKQIVLH
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